Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00397 CCCTCTAGCCCTCTTTACCCCTTTTCTTTCTCACTTGCATTTGGGCATATTATGCAGTGCTAAAAGCTAATGACATGGTTATTGATGGCATGACAGTGAACCAAAGAAGTTCCTAATGGCATCAACATCTTGTGTTAACAAGACTCCGCTCTCCAAGAAAGAAGCAGTTTCTAGCTATCAACAATATCCTCCAGCTACGGCAAGATACGAGGATGTTGTAGCTGATCCTAAGCTATTTATGTCTACCTTGGAGAAGCATCATGCTGCTATGGGCACCAAGTTCATGATCCCCATTGTTGGAGGCCGAGAACTAGATTTGCATCGGCTCTTTGTGGAAGTAACTTCACGTGGAGGCATTGAAAAGATTATCAGAGAGAGAAGGTGGAAAGAAGTTACTGCTGTATTCAATTTTCCATCAACAGCTACAAATGCTTCCTTTGTCCTGAGGAAGTACTATTTTTCATTACTTCAACACTATGAACAAATCTACCATTTTAAAGCTCATGGATGGATTCCTAGCGCTAATGATGCTTTACAGAGTTTTTCACCCGTGCCAGTTCCTACTCAAAGGACACAATCTTTGCAGGCCTCGCCTGGACTTCAATCTGCTGTGCTTCAGCAGTCTAGGGTTAATGCTGCTGAATTGCCTGAAGCTACATCAGCATCTTCAGCAGGATCTCCAGTTCTTGGGGTCATTGATGGGAAATTTGAAAGTGGGTATCTTGTTACTGTCACAATTGGTTCAGAGAAACTTAAAGGTGTACTTTATCAGTCTCCACAAATGCCTGTACTGCCATCACCACAGCAGTATAGTGTTTTGGCCATTAACAATAATCCCTCTGCCTCATCTGGTGTCCAACGTCGCCGGCGCCGGAAGAAATCAGAGATAAAAAGAAGGGATCCAGCTCATCCAAAGCCCAACAGAAGTGGATACAATTTCTTTTTTGCAGAGCAGCACGCAAGACTGAAACCTCTCCACCAAGGGAAGGACAGAGAGATCAGTAGAATGATTGGTGAACGCTGGAACAAGTTGAAAGATTCAGAGAAAGCAGTTTATCAAGAGAAGGCCCTTAAGGATAAAGAGAGGTACAGAGCAGAGATGGAGGATTACCGTGAAAGGCTGAAGACAGGTAATGTCATCAGTGATGCTGTGCCACTGCAACAACGGCTACCTGTAACGGATATGATGGATGTAGATGCAGATGTAAAGCTGGATGAAACAGAAGCGGGGGACTTGCTGCAGACACCTGATAATGAGAGTAGTTCTGGTGGAAGCGATTATGAAGATGATCAAGCTGCAGAGAAGGATTTGGATTTAGATGTGTCTGTTGGAATTGCAGTGGGGGCTGAATCAAGCTATTTGGGTACAGAGAAGTCGTCCAAGGAAGTTGATTATGAGGTTCAGAAGAGAGACGGAGATGGTGGAGGTGAACCAGCTAAAAAAAAAATGGATGACGGCCAAAGCTTGCTGGCAATACTGTAG 1483 0.4417 MASTSCVNKTPLSKKEAVSSYQQYPPATARYEDVVADPKLFMSTLEKHHAAMGTKFMIPIVGGRELDLHRLFVEVTSRGGIEKIIRERRWKEVTAVFNFPSTATNASFVLRKYYFSLLQHYEQIYHFKAHGWIPSANDALQSFSPVPVPTQRTQSLQASPGLQSAVLQQSRVNAAELPEATSASSAGSPVLGVIDGKFESGYLVTVTIGSEKLKGVLYQSPQMPVLPSPQQYSVLAINNNPSASSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHQGKDREISRMIGERWNKLKDSEKAVYQEKALKDKERYRAEMEDYRERLKTGNVISDAVPLQQRLPVTDMMDVDADVKLDETEAGDLLQTPDNESSSGGSDYEDDQAAEKDLDLDVSVGIAVGAESSYLGTEKSSKEVDYEVQKRDGDGGGEPAKKKMDDGQSLLAIL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00397 455 MobiDBLite consensus disorder prediction 375 389 - -
Bach2g00397 455 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 266 333 IPR009071 -
Bach2g00397 455 ProSiteProfiles ARID domain profile. 35 126 IPR001606 GO:0003677
Bach2g00397 455 SMART hmgende2 265 334 IPR009071 -
Bach2g00397 455 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 6 384 - -
Bach2g00397 455 MobiDBLite consensus disorder prediction 368 397 - -
Bach2g00397 455 MobiDBLite consensus disorder prediction 238 272 - -
Bach2g00397 455 FunFam High mobility group B protein 15 248 343 - -
Bach2g00397 455 Coils Coil 315 335 - -
Bach2g00397 455 MobiDBLite consensus disorder prediction 415 455 - -
Bach2g00397 455 SMART ARID_2 32 122 - -
Bach2g00397 455 Pfam HMG (high mobility group) box 266 333 IPR009071 -
Bach2g00397 455 Gene3D - 22 132 IPR036431 GO:0003677
Bach2g00397 455 Pfam ARID/BRIGHT DNA binding domain 39 122 IPR001606 GO:0003677
Bach2g00397 455 FunFam High mobility group B protein 15 29 142 - -
Bach2g00397 455 CDD ARID_HMGB9-like 37 122 IPR045303 GO:0003677
Bach2g00397 455 SUPERFAMILY HMG-box 254 339 IPR036910 -
Bach2g00397 455 CDD HMG-box_AtHMGB9-like 266 332 - -
Bach2g00397 455 SUPERFAMILY ARID-like 33 135 IPR036431 GO:0003677
Bach2g00397 455 Gene3D High mobility group box domain 250 344 IPR036910 -
Bach2g00397 455 MobiDBLite consensus disorder prediction 419 446 - -
Bach2g00397 455 SMART bright_3 36 127 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00397 Bach-Chr2 8838877 8844195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00397 1 366 ARID Transcription Factor Family AT1G04880 60.209 1.28e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bach2g00397 ARID 5.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00397 - - qsa:O6P43_023979 577.785