LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g00386	ATGAACTCCTTACACAATAGAGTTTGCTTTATCTTTGTTCCAATTGTGCTAGTTCTGCTGTACTGTTTTATGGCTTACAGATGTATTGCTGCAGTTGAAGTCCACAATATAAACACTGACCAGATTTCTCTTCTTGCCTTCAAAGATCACATCACTTATGTCCCCGGTAATTTCCTTGCCAAAAATTGGTCTGTTAAAACCCCTGTTTGCAATTGGTTTGGGATCACTTGTGCTTCCTCTCACCATAGAGTTACTGCCCTAAATCTCTCTTACATGGGCCTTGTGGGCACCATCCCTCCTCATGTCGGAAACCTATCATTCCTTTCTTTGTTAGATCTTTCCAACAATACCTTTCAAGGTTCCCTTCCTAGTGAATTAGCTCGGTTACGTAGAGTGAAACTCATTCGCTTACGCTACAATAACTTTACTGGGGAGATCCCATCATGGTTTGTGCTCTTACCAAAAATTGAAGAGTTGGGATTTGGCTATAACAGTTTCTCGGGTAAGATCACAGCCTCGTTGTTCAACATAACTTCACTGCAAAAGCTTGATCTTGCTCATAACAAACTTTGGAGTTACCTACCATCCAACTTCTTCAACGCCCCTTCATTACAATGGGTGAACCTATGGAGTAACCAAATCACAGGTCCAATCCCAAGCATCATTTCAAACATATCGTTGCTTCGAGTAATCAATCTTGGTAACAATGAACTTTCTGGTCATGCCCCAGAAAACATCTTCTATTACCTTCCAATGTTGGAATTTTTTAACTCAGAACACAATGACTTCTTTGGAGAAATTCCAGTTAGCCTGTTTAATTGCAAGCAGCTGCAAGTACTGTCTTTATCTTACAATAGATTCAAGGGAAACATACCCAGAGAGATTGGGAATTTGACAATGCTTAATGTGTTGTTCTTTAGCCACAACACTTTGCAAGCCACTGAAATTGTGTTGAAATTTGTTTTGCCAATAGGGATTGCCATAATTCTTATATTGATATTCTTATATGTGTTCAAATGGAAAAAGAACAATAAGCCATCCAATCCACAGGAAGACTCAACAATAAGAACATGGAGAAGAATTTCATACCATGAACTTCAGCAAGCTACAAATCAGTTCAATGATGTTAATTTACTTGGTACTGGGAGCTTTGGAAAAGTATATAAAGGAACACTTGCTGATGGGATGAATGTTGCAATAAAAGTTTTCAATTTGGACCTTGAAGGAGGATTTAGAAGCTTCCATTCTGAATGTGAAGTACTGCAAAATGTCCGCCATCGAAATCTTATCAAAATCATTAGCAGTTGTAGTAATGATATTGACTTCAAGGCATTAGTTTTAAGTTACATGCCTAATGGGAGTTTAGAGTGGTGGTTATACTCTGGTAATCGCCCATTGAATATAATTAAAAGGCTGAACATAATGATTGATGTTGTGACAGCATTAGATTATCTACATCATGGTTGTCCTGTACCAATTGTGCATTGTGATTTAAAACCTAGCAACATACTGCTAGATCAAGATATGGTTGCGCATGTGACAGATTTTGGCATCTCAAAACTTTTGGGTGGAGATTCATTGACATACACTATGACACTAGCCACAATGGGATATATGGCTCCAGAGTATGGATTGCAAGGGATTATTTCCAGGAAAGGTGATGTATACAGCTATGGTATTTTGCTTATGGAAACTTTCACCGGAAAGAAGCCCACAAATGAAATGTTCCATGAAAAACTTGGCATCAAGCATTGGGTGAGAGATTCATACCCTGATGCAATAATTGATATTATTGATGTCCAACTGTTGAAAGAAGACACGAGACAATTAGCTGTTAAGGATTGCTTATCATCAATCATGCGGTTAGCATTGGATTGTTCAGAAGATTCTCCAACTGAAAGGGGAAATATGAAAGATGTCTTAGCAACACTCAGGAATATCAAAACCAAGTTTTTGAATGAGCCCACAAATCGCTAAGAATCTGTCTGAGTTTGTTTACAAATTTCTTCTGGGGCTCGGTGTCGATAAAGAGACAAAGCAATATTGAATTATCTACTACATTTGTGGAGTCATAGAAATCTCTTAAACTCCTTGTTCTTTTATGACTTTCAAGAGAGCTAGAAGAAAATAGAAGGATAGAATTCCCATTGGGT	2153	0.3795	MNSLHNRVCFIFVPIVLVLLYCFMAYRCIAAVEVHNINTDQISLLAFKDHITYVPGNFLAKNWSVKTPVCNWFGITCASSHHRVTALNLSYMGLVGTIPPHVGNLSFLSLLDLSNNTFQGSLPSELARLRRVKLIRLRYNNFTGEIPSWFVLLPKIEELGFGYNSFSGKITASLFNITSLQKLDLAHNKLWSYLPSNFFNAPSLQWVNLWSNQITGPIPSIISNISLLRVINLGNNELSGHAPENIFYYLPMLEFFNSEHNDFFGEIPVSLFNCKQLQVLSLSYNRFKGNIPREIGNLTMLNVLFFSHNTLQATEIVLKFVLPIGIAIILILIFLYVFKWKKNNKPSNPQEDSTIRTWRRISYHELQQATNQFNDVNLLGTGSFGKVYKGTLADGMNVAIKVFNLDLEGGFRSFHSECEVLQNVRHRNLIKIISSCSNDIDFKALVLSYMPNGSLEWWLYSGNRPLNIIKRLNIMIDVVTALDYLHHGCPVPIVHCDLKPSNILLDQDMVAHVTDFGISKLLGGDSLTYTMTLATMGYMAPEYGLQGIISRKGDVYSYGILLMETFTGKKPTNEMFHEKLGIKHWVRDSYPDAIIDIIDVQLLKEDTRQLAVKDCLSSIMRLALDCSEDSPTERGNMKDVLATLRNIKTKFLNEPTNR	658

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g00386	658	FunFam	Serine-threonine protein kinase plant-type	353	449	-	-
	Bach2g00386	658	SUPERFAMILY	Protein kinase-like (PK-like)	346	644	IPR011009	-
	Bach2g00386	658	FunFam	Nuclear pore complex protein NUP107	37	196	-	-
	Bach2g00386	658	Gene3D	Ribonuclease Inhibitor	194	247	IPR032675	-
	Bach2g00386	658	Pfam	Leucine rich repeat N-terminal domain	38	77	IPR013210	-
	Bach2g00386	658	ProSitePatterns	Protein kinases ATP-binding region signature.	379	401	IPR017441	GO:0005524
	Bach2g00386	658	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	493	505	IPR008271	GO:0004672\|GO:0006468
	Bach2g00386	658	SMART	serkin_6	373	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach2g00386	658	ProSiteProfiles	Protein kinase domain profile.	373	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach2g00386	658	Gene3D	Ribonuclease Inhibitor	37	193	IPR032675	-
	Bach2g00386	658	Gene3D	Ribonuclease Inhibitor	248	324	IPR032675	-
	Bach2g00386	658	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	450	657	-	-
	Bach2g00386	658	Gene3D	Transferase(Phosphotransferase) domain 1	450	656	-	-
	Bach2g00386	658	Gene3D	Phosphorylase Kinase; domain 1	343	449	-	-
	Bach2g00386	658	SUPERFAMILY	L domain-like	40	313	-	-
	Bach2g00386	658	Pfam	Protein kinase domain	374	641	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach2g00386	658	PANTHER	OS04G0122200 PROTEIN	109	653	-	-
	Bach2g00386	658	Pfam	Leucine rich repeat	131	190	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g00386	Bach-Chr2	8043942	8049773	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g00386	75	651	Receptor kinase-like Gene Family	AT3G47570	34.154	4.60e-110	353

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Bach2g00386		Pkinase	8.4e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g00386	-		K13420	qsa:O6P43_012810	513.457