Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00379 ATGGCTTCATCTTTGGGGGATCTTTTAAAAGAGGAAGGATTCAAAGGAAGCAGAAGGATGACAAGATCCAGATCTTCCTTCCACTCTGATGCAGCAACTATGCCGCATTACTCTTTTCAAGATCAACAAAGGAGACTTTCTGTATCAAGTGAAAGAAGTAAGACAGAAAGAACAAAATCTGATGTTTCACAATATCAGATGAGAAGTGAGTTTTTGAATGGTAATAGTGCTAGGAGCAGATTAGCAGGGGATAATCTTTTGAAAAGAGGGAAAATGGAAGAAGGATTGAAGAATGGAAATGGGGAGAAATCTTCTACCAATGCAGAGGCAAGCAAGGAATTCATCAGTTCATCAGAATGTGTTCCAAGACATGAGATAACTGAGGTGAAGGAGGAAGCAGAAAAAAGAGTCAAAGATATACTTTCAAATGAAGTTTCTTATGCAAAGAGAGGGACAGACAAGAGTTTGAACGAATTTAAGGAAAGGGAGAAATGGAAAGAAATGCATGTGAAGGATGCAAAGGTGAATAAGAGGCATGGGAGTAGTTCCGATGTAAATAAGCTTGGACATATTAGTGGGCATACAAGAAAGAATAATAAACATCAGGAGAATTCACTCAATAGATCTAATAGCAAAAACTTTGAAGATATTTATCATCAAAATCATGATGTAAGAGCAGCTTCTAATCTAGCTCTTGATGAAGTTGCTGTCCAAGCATTAGTTTCAATTCTGAATGGATATGTAAAATGTTTTCTAAAAGATGAGGACTTCCGGAGTACACTGCGTCACAATTGTTTTTCCTCCTTAGATTTTATTGAACTGGATGAAGAGCACAGTACTGAGACAAAAGTAATAAGAAGTCTTGAGCAAGCAATTGAAACAGTTGAACAAGCTGCTGAGGAATCTGTATCTGGGAATGATTTGAAAAGAGCCTCATTGAAACTAAGCATTATTACAGGTTTGAGTTTAAATGATTTGATGCGTGGGTTTACCTGTGGGATTCCTAATTATAAGTTGTCAGCTTGTGCTCATCTTTATCTCAGTGTGTTATATAAGATGCAGAGAAAAGACAAGGTGTCAGCAAAACACCTTTTGCAAGTATTTTGTGATTCACCACGTCAGGCGCGAACAACATTATTGCCAGAACTGTGGGAGTATCTATTTTCTCCACATCTTTCTCATTTGAAGGTATGGTACAAAAAGGAAGCTGATATTTTAGCAGGTAACACAAGCAGAACCAGAAAACTGAGGCTTCTTGAAAAGGTTTACAATGAAAATTTGGATTCTGGAACTTATCTATTTGCTGTATACTACAAAGATTGGCTCACTGAAGGAGTAGAAGCTCCATCTATTCCTTTTATCAGCATTCCTTCAATATCTGCTTTGGAAAGTCAGTGGGGAAGTTCACTTGGTCATTCCTCAGAGCTTGCTAGCTCAGTTGATACTTCCTCACAACAGCCAATGGTCAGCAAAAAACTCTATGATTCTGTCTTTGGTGGCTTGAGAAAACTTGGAGTCAGTGAAGATGAAGATGATAAGGGAGAAAATAGCCTAGATAACTGTGTGAGAAGCCCAGATGGTCCCACTATAGTTAAAAAAACAATAACATATGCATCTGAAAAGGTTAAATATACACATCAAGATATTGACGAAGATTTCAGTACGAGTCCACCAGTTTCTACATTCCATCCTCAGGAAGGAATGTCAGTGTCTATTGAAGAAGAATGGAGAGAAAGAAATCTCAGTGATGACATTGGCAACTCTTTCATTTCGCAAAAAACTAATGTAAACAGCTGCATGTTAGATGCATGGGAACATGGGAAAGCGAATGAAGTTACAGTCAGAACGGTTACAAGATCTATTTTGGAATTTCAAAGGACCAAAAGCTCTTTGAATTGCACTGTTTCTACTCTTTTAAAGTCCAGTGAGAAATCTGTCTCCAATTCCATTGAAAATATGCACTCAAGTAAGTTATGTTTGTCTCTAGAAGGATTACAATTTCCAAGCATTCCACTGGAATTCATTTGTCCTCTCACTGAGACTCTGTTTCAGGATCCAGTTACCCTAGAGACTGGCCAAACATTTGAACGAGCAGCCATTGAGGCATGGTTTGAAAAGGGAAACAAAACATGTCCAATAACTGGAAATACTTTAGATTGTGTGGCCATACCACAAACTAATCTTGTTTTGAAGCGTTTGATTGATAATTGGAAATTGGAACAATTTAATTGGCTCTTGGATTCTGCATCTCAAAATGTTGGAAATCCAGGGAAACATAAATTGAAAGATGAGGACGAGGCTATTGTTTTCAAATTAGAGAGCCTTCTTACTTCTTTGAATGAAGAGGACAAGACAATTTATGCTAAGTATCTCGTGTCTTTAGGGGTTCTAGCATTTCTTCTGAGGAGATTTGAATTAGGTAATATGGAAGAGAAGACACATGTGGTAGCACTCTTGCTAACTTGTATTGAAGCAGACTGTGGTTGCCTATATCAGATAGCAAGAGAAATTAACAAAGAATGTCTTCTTGAGCTTCTTCATAGCGAGGAGGTTACCCCAACAAACAATGCAGTTTTACTTCTTACTGAAGTTTTGTCTCTAAAGAGGAGAAATGATGTTACTTCATTCTTAAGTGGTTTGATGGGTGAAGATGCGTTCAACACAATGCACTTTCTGCTCACCTATCTTAAGAAGTCTCTACCACATCAGAAACCCCTCATTGCTGTCCTTTTGCTACACTTTGATCAACTGCTTGAACCGGAAAAGTATAGCATATACAGAGAGGAGGCTGTTAATGCCATTGCAATGGCTCTTGGTGCTAGCTTAAATGATGAAAAGGTTCGAGAAAAGTCTTGCAGAGCACTTTCTATATTGGGAGGGCTTTTTTCTTCCACTGGGAAGAAAATAACCATAACTAGCATCTTAAAGCAAGCAGGATATAATAATGATGTGTCAGAAGGGAACCCTAGTGACCATGAAGAAGAGCCTTTACTATGGGATGACACCATTTCTTTGGAACACGAAGAACAAAGGAGTGGAGAGGGGTTGTCGAACTTGTTAGAATCATTGATTGGTAATGGAGAAAGGCCATTTTTGAAGACCATTTCTAGATGTTTAGACTCTAAACACCTAGATTTGGTAGAGATGTGTCTAATAACTATTACATGGTTTAGCTGCTCACTTTCTAAACCATGTGATGCTGGATTACACCTTCCTGTCTTCTTAGCCGTCATCTCTCAGTTAAAAGGAATTCTGGAAAATGGAGAACTTGAACTCAAAATTCTTGCCTCTGTGTCCTTGCTGAACTTCAGTAAAGTATCAGAATGCAAAACTCTTTTGATGACTATGGCAGAAGATATTGCCGATCCTCTTCATAGACTAGCTGATGTAACATGGGTTGCAAAGCAGCTTCATGCTATTGTATCCGGGGAGGACCTATAA 3441 0.383 MASSLGDLLKEEGFKGSRRMTRSRSSFHSDAATMPHYSFQDQQRRLSVSSERSKTERTKSDVSQYQMRSEFLNGNSARSRLAGDNLLKRGKMEEGLKNGNGEKSSTNAEASKEFISSSECVPRHEITEVKEEAEKRVKDILSNEVSYAKRGTDKSLNEFKEREKWKEMHVKDAKVNKRHGSSSDVNKLGHISGHTRKNNKHQENSLNRSNSKNFEDIYHQNHDVRAASNLALDEVAVQALVSILNGYVKCFLKDEDFRSTLRHNCFSSLDFIELDEEHSTETKVIRSLEQAIETVEQAAEESVSGNDLKRASLKLSIITGLSLNDLMRGFTCGIPNYKLSACAHLYLSVLYKMQRKDKVSAKHLLQVFCDSPRQARTTLLPELWEYLFSPHLSHLKVWYKKEADILAGNTSRTRKLRLLEKVYNENLDSGTYLFAVYYKDWLTEGVEAPSIPFISIPSISALESQWGSSLGHSSELASSVDTSSQQPMVSKKLYDSVFGGLRKLGVSEDEDDKGENSLDNCVRSPDGPTIVKKTITYASEKVKYTHQDIDEDFSTSPPVSTFHPQEGMSVSIEEEWRERNLSDDIGNSFISQKTNVNSCMLDAWEHGKANEVTVRTVTRSILEFQRTKSSLNCTVSTLLKSSEKSVSNSIENMHSSKLCLSLEGLQFPSIPLEFICPLTETLFQDPVTLETGQTFERAAIEAWFEKGNKTCPITGNTLDCVAIPQTNLVLKRLIDNWKLEQFNWLLDSASQNVGNPGKHKLKDEDEAIVFKLESLLTSLNEEDKTIYAKYLVSLGVLAFLLRRFELGNMEEKTHVVALLLTCIEADCGCLYQIAREINKECLLELLHSEEVTPTNNAVLLLTEVLSLKRRNDVTSFLSGLMGEDAFNTMHFLLTYLKKSLPHQKPLIAVLLLHFDQLLEPEKYSIYREEAVNAIAMALGASLNDEKVREKSCRALSILGGLFSSTGKKITITSILKQAGYNNDVSEGNPSDHEEEPLLWDDTISLEHEEQRSGEGLSNLLESLIGNGERPFLKTISRCLDSKHLDLVEMCLITITWFSCSLSKPCDAGLHLPVFLAVISQLKGILENGELELKILASVSLLNFSKVSECKTLLMTMAEDIADPLHRLADVTWVAKQLHAIVSGEDL 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00379 1146 MobiDBLite consensus disorder prediction 173 211 - -
Bach2g00379 1146 MobiDBLite consensus disorder prediction 99 114 - -
Bach2g00379 1146 SUPERFAMILY RING/U-box 666 741 - -
Bach2g00379 1146 MobiDBLite consensus disorder prediction 1 64 - -
Bach2g00379 1146 Pfam U-box domain 670 741 IPR003613 GO:0004842|GO:0016567
Bach2g00379 1146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 669 745 IPR013083 -
Bach2g00379 1146 Coils Coil 123 143 - -
Bach2g00379 1146 MobiDBLite consensus disorder prediction 11 25 - -
Bach2g00379 1146 MobiDBLite consensus disorder prediction 47 63 - -
Bach2g00379 1146 SUPERFAMILY ARM repeat 760 1128 IPR016024 -
Bach2g00379 1146 ProSiteProfiles U-box domain profile. 669 744 IPR003613 GO:0004842|GO:0016567
Bach2g00379 1146 MobiDBLite consensus disorder prediction 83 116 - -
Bach2g00379 1146 CDD RING-Ubox_PUB 671 718 IPR045210 -
Bach2g00379 1146 PANTHER OS04G0584500 PROTEIN 1 1144 - -
Bach2g00379 1146 SMART Ubox_2 673 737 IPR003613 GO:0004842|GO:0016567
Bach2g00379 1146 MobiDBLite consensus disorder prediction 26 46 - -
Bach2g00379 1146 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00379 Bach-Chr2 7842158 7856143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00379 669 784 U-box Gene Family AT1G23030 34.167 6.28e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00379 - - gmx:100820501 1287.71