Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00377 ATGATTTCAAATGTTATGATAGATGGAAACGATGGCGTTTCAGATTCCAAAGATGTTACTTGTGCTTCTCATGCAGCAAAACGCGTGAGGTACGAAGATGCAGAGCTGCAAAAGTTCAAAAGCGTTGTGCCTCAACAAAATGGGCATTTGGGTGCCCAAATATATGCAAATCACCAGAAAATTTCCCTGGGAACGTTCAAATCTGTAAGAGAAGCCGCCATGGCTTCTGATGGCGCCAGCATTAAACTTCGAATCAGGGATCAGAGTCATAGAAACTTTCCATGGAATCATCAAACAGTTCAAGAACCTCAATTTCAAAACCATTATAGCACAGAAGCAGTTTCAAAATTTGCTACATTTCTAAGGAATATTCAAACACCACAATGGGAAGGCATTGAAACCAGTATTAAGCAAATAAGGGAGAATAATGGAGATAAAAAGCACTTTTGCAGCCAACTTTTTCAAAAGGAATTAACACCAAGCGATGTGGGGAAGCTCAACAGGCTTGTCATCCCCAAAAAGCATGCTATTAGGTACTTTCCTTGTGTTTGTGGCACCGATGTAGAGGATAATAATAATGGGATGGAAAATGGTGGGGTAGGTGAAAGTACTGAGCTTGTATTTTATGACAAGTTCAGCAGATCATGGAAATTCAGGTATTGCTATTGGAGGAGCAGCCAGAGTTATGTCTTCACAAGGGGGTGGAATAGGTTTGTGAAGGATAGAAATATAAGGGCTAAGGATATTATTGTATTTTACACTTGTGAGCAAGCAAACAGAGGCGAAGGGGGTCATGTTTTCTCTTTGATTGATGTAATCTATAATGGAGATGAAAGAATGAAGTGCTTTGGAGGGGCGAGGAGAGAATTGAAACAAGATTTGGGAAACGTTTCCAGTTTTAATGAAGTAAAAGAAGATGATGATCATGACAGAGAAAATTATGAAAAGGAACTGGGTGCATTGCATTCATCAAAGAATGTACAAAAAGGCTTGAGACTCTTTGGTGTACATATTAACTGA 1020 0.3931 MISNVMIDGNDGVSDSKDVTCASHAAKRVRYEDAELQKFKSVVPQQNGHLGAQIYANHQKISLGTFKSVREAAMASDGASIKLRIRDQSHRNFPWNHQTVQEPQFQNHYSTEAVSKFATFLRNIQTPQWEGIETSIKQIRENNGDKKHFCSQLFQKELTPSDVGKLNRLVIPKKHAIRYFPCVCGTDVEDNNNGMENGGVGESTELVFYDKFSRSWKFRYCYWRSSQSYVFTRGWNRFVKDRNIRAKDIIVFYTCEQANRGEGGHVFSLIDVIYNGDERMKCFGGARRELKQDLGNVSSFNEVKEDDDHDRENYEKELGALHSSKNVQKGLRLFGVHIN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00377 339 ProSiteProfiles B3 DNA-binding domain profile. 154 273 IPR003340 GO:0003677
Bach2g00377 339 Pfam B3 DNA binding domain 154 256 IPR003340 GO:0003677
Bach2g00377 339 SUPERFAMILY DNA-binding domain 39 95 IPR016177 GO:0003677
Bach2g00377 339 SMART rav1_2 38 100 IPR001471 GO:0003700|GO:0006355
Bach2g00377 339 SUPERFAMILY DNA-binding pseudobarrel domain 153 255 IPR015300 -
Bach2g00377 339 CDD B3_DNA 153 253 IPR003340 GO:0003677
Bach2g00377 339 Gene3D - 150 272 IPR015300 -
Bach2g00377 339 ProSiteProfiles AP2/ERF domain profile. 38 94 IPR001471 GO:0003700|GO:0006355
Bach2g00377 339 SMART B3_2 154 273 IPR003340 GO:0003677
Bach2g00377 339 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 37 338 IPR044800 GO:0003700
Bach2g00377 339 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00377 Bach-Chr2 7614646 7615665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00377 38 259 RAV Transcription Factor Family AT1G50680 56.118 3.34e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach2g00377 B3 2.6e-24 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00377 K09287 - cave:132163702 334.724