Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00318 ATGTACCCCTCTTCTTCTTCCTCATCCTCAAAACCCATACCAGCCCAAAGCGGGTTGACCCGATTCTGTTCTGCACCCAGCTCCCTCTTAACAACAGCCCTCCATGAGGTCACCGGAGCTGACCGGGAATTCTCCGCCGTCGGATCACGCTCTCTCGTCGGCCATTACTTCTCCGGCGACTCATCTTCCATCACCTCCGAGTCTACCTGCAAAGTCAACCCATCTAACGATCCAGAACAGCCGAAATTAGGATTACAGAGGTCCTACGGTCTCCATGAGACAGCCGCTAGGGACTTCCCCTCGCCAAGACATTTAAAGAGCACCGCCGCCGCCGGTGGAGCTGGATCCTCGTCTTCATCCTCCGCTTTGGTTCGTCAGAAGAGCTCACCGGCTGGCTTCCTTAGCCATCTTACAAGCTCAGGTGACAACAACGCAGGCTTCTCAATTTCAAGGGGCTCTGGAAGCTACAACTGGCAAGGCATCCCTAATAATGGCCATGGTGTGTCAAGGTTGAAGTCTCAGTTGAGCTTCACCGGGCAAGATTCTCTTTCACATATATCAGAGGTGAGTGAAAACATTGTTGATGGCATCAGTTCTGACAACAACCACCGTAGAACTACACACTCTTATGTCACTACCAGCTTCGGAATGGACACATGGGATAATTCAAACTCCATTGTGTTTTCTACACCGGCAAGTAAGCGTGCTAAGAATATTGATGGAGACATTCTAAACTGTCTCAACGCACTGGATTCTCAGTTTAGCTTGCCACAGACAACTCTGGAAATGGCAACAATGGAGAAGCTAATTCAAATTCCTGAAGATTCTGTCCCATGTAAAATTCGTGCCAAGCGAGGATGTGCCACTCATCCACGAAGCATTGCAGAACGTGAGAGAAGAACTAGGATAAGTGGGAAACTGAAGAAATTACAGGAGCTTGTACCTAATATGGATAAGCAAACAAGCTACTCAGACATGCTGGATTTGGCTGTTCAACATATCAAAGGGCTTCAAAATGAAGTTCAGAAGCTCCATGAAGAACTTGAGAATTGCACCTGTGGATGTAAAGAAAGCAAATAATGTACTTTTTGACAGTACAGGGGAAATGTAAGCTGCGATTTTGTTCTTCCTCAAGATTAATTCAATAACGCAGGAATAGTGGAATATAGAAATTTATTTCCTAGAATTGTACATAATGTATGCTGTCATCAGGTAGCCTTAGGGAAATTTCATCTCTTT 1239 0.4609 MYPSSSSSSSKPIPAQSGLTRFCSAPSSLLTTALHEVTGADREFSAVGSRSLVGHYFSGDSSSITSESTCKVNPSNDPEQPKLGLQRSYGLHETAARDFPSPRHLKSTAAAGGAGSSSSSSALVRQKSSPAGFLSHLTSSGDNNAGFSISRGSGSYNWQGIPNNGHGVSRLKSQLSFTGQDSLSHISEVSENIVDGISSDNNHRRTTHSYVTTSFGMDTWDNSNSIVFSTPASKRAKNIDGDILNCLNALDSQFSLPQTTLEMATMEKLIQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNEVQKLHEELENCTCGCKESK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00318 359 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 350 - -
Bach2g00318 359 SMART finulus 293 343 IPR011598 GO:0046983
Bach2g00318 359 CDD bHLH_AtbHLH_like 292 344 IPR045239 -
Bach2g00318 359 FunFam Transcription factor bHLH130 family 288 357 - -
Bach2g00318 359 MobiDBLite consensus disorder prediction 60 82 - -
Bach2g00318 359 Coils Coil 327 354 - -
Bach2g00318 359 Gene3D - 288 357 IPR036638 GO:0046983
Bach2g00318 359 Pfam Helix-loop-helix DNA-binding domain 292 338 IPR011598 GO:0046983
Bach2g00318 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 287 337 IPR011598 GO:0046983
Bach2g00318 359 MobiDBLite consensus disorder prediction 60 123 - -
Bach2g00318 359 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 290 351 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00318 Bach-Chr2 4942445 4954344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00318 13 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 50.000 5.68e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach2g00318 HLH 9.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00318 - - qsa:O6P43_023660 498.434