Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00299 ATGAGCATGTTAGCAGCTTCTTCATCACAAACCAATTTTGCCAAATTCTCAAGATCTTCATCTGCAACAACCAAATCATTCATTTTGACCAATAATCCAAGTGAGCTATTTGTTCACTCTCTTCAGTTCTCCATTGACAAGGCCAACCCTGCTCAAGCCCTTGTCTCTAACCTCACTATTTCCCATAGAAAATCCCACGACACTGAAACTTCTGGTGGCTTCATTGACTGCTTGGAGCTGCTGGATGACACTCTTGACCAGCTCCAAAATGTGGGTAAGGTGTACAAAAAACAGTTTCATGTCTCTGATGATATCCAAACATGGCTTAGTGCTGCTCTTACCAATCAAGAAGCCTGCCTTGAAAGCCTTCAAAATTGTGGGTCTAAATTAGAGAAAAGGCTTATAGATGGTTTGGCACAAAATCTGAGTCAATCAATAAGCAACTCCTTGTCAATTTACATGCATGATAAGGTTAAACAAGAGAAGACTATGAGAAGTAGTGATGGTGGTGGTAGGAGATTGTTATCCAATGATATTAATGGTTTTCCATATTGGGTTGAGAGGAAGCTTCTAGAAGCATCTATAGAGGAGATTGGAGTACATGCTGTGGTGGCCAAAGATGGGAGTGGGACCCACATGACTTTAGGTGAGGCACTTAATGAGCTGAAAGCTTCACTAGCTGGTGGTGGTGGAGGTGGGAGGACTGTTATTTACATAAAGGCAGGAACTTACAATGAGAATATCAAGATTCCCACAAAGCAAAAGAATGTTATGTTGGTTGGAGATGGAAAGGGCAAAACTGTCATTGTAGGCAGTAGAAACTCAAAGATGGCTGGACGACATTCCAATCTGCTACTGTTGATATCAAAGCTTGGTGTTTAA 882 0.4138 MSMLAASSSQTNFAKFSRSSSATTKSFILTNNPSELFVHSLQFSIDKANPAQALVSNLTISHRKSHDTETSGGFIDCLELLDDTLDQLQNVGKVYKKQFHVSDDIQTWLSAALTNQEACLESLQNCGSKLEKRLIDGLAQNLSQSISNSLSIYMHDKVKQEKTMRSSDGGGRRLLSNDINGFPYWVERKLLEASIEEIGVHAVVAKDGSGTHMTLGEALNELKASLAGGGGGGRTVIYIKAGTYNENIKIPTKQKNVMLVGDGKGKTVIVGSRNSKMAGRHSNLLLLISKLGV 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00299 293 ProSitePatterns Pectinesterase signature 1. 231 250 IPR018040 -
Bach2g00299 293 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 152 IPR035513 -
Bach2g00299 293 SUPERFAMILY Pectin lyase-like 200 274 IPR011050 -
Bach2g00299 293 CDD PMEI-like_3 30 152 - -
Bach2g00299 293 Pfam Pectinesterase 202 278 IPR000070 GO:0030599|GO:0042545
Bach2g00299 293 SMART PMEI_2 12 152 IPR006501 GO:0004857
Bach2g00299 293 PANTHER PECTINESTERASE 9 275 - -
Bach2g00299 293 Pfam Plant invertase/pectin methylesterase inhibitor 16 152 IPR006501 GO:0004857
Bach2g00299 293 Gene3D - 196 287 IPR012334 -
Bach2g00299 293 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 155 IPR035513 -
Bach2g00299 293 NCBIfam pectinesterase inhibitor domain 25 153 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00299 Bach-Chr2 4583904 4584871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00299 6 276 Carbohydrate Esterase AT3G59010 51.254 4.32e-72 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00299 - - qsa:O6P43_002541 251.521