Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00235 ATGGTTATGGTCCTCAAGTTTCGTAACATCTTCCTTGCGGTGCTAGCCACAAATCCACAAACATTGAGTTCATATGCTGCATTGAGGTCTGGTCTTTTTGTGTCAGAATTCAGTCACAGTGCTTTGGGCAACAATTTGCAACTGGCACCCCATCTTACTCAAAGCAGTGTTGGGATTTTCTGGGATTTAGACAATAAACCTCCGAAGTCATTCCAGCCTTATGAAGCTGCCACCAAACTGAAAGTGGCTGTATCTTCCTTTGGGGTCGTTCGGCATATGATAGCTTATGCTAATCGCTACACCTTTAGCCATGTACCTCAAGGTGTTAGGGAACAGAGAAAAGAGAGGAAGTTGTTGAATCATTTAGAGAATAAAGGTGTAATCAAGCCCGTTGAGCCTTATCTTTGTCGGGTATGTGGGAGAAAATTTTATACAAATGAGAAGCTTGTTAATCATTTCAGGCAAATTCATGAGCGTGAGCATATGAAAAGATTGAACCAGATTGAGTCGGCAAAGGGGAGCAGAAGGGCGAAATTGGTAGGTAAATATTCTATGAAAATGGAAAAGTATAAGAATGCTGCAAGGGATATGTTAACTCCCAAAGTGGGCTATGGTCTGGCGGATGAGCTAAAACGGGCAGGGTTTTGGGTTCGGACTGTGTTGGATAAGCCACAAGCTGCAGATATTGCATTAAGAGATAACATGGTGGATATGATGGATACTAGGCGGGTAGACTGTGTGGTTCTTGTGTCAGATGATTCTGATTTTCTTGGTATTTTAAAGGAGGCAAGGCTACGATGCCTCAAGACAGTTGTCATTGGGGATACAGATGATGGGCTCTTGAAGAGGACAGCTGATGCTGCTTTTTCCTGGGAGGAAATCTTGATGGGGAAGGCTAAGAAAGAGGCAGTATCAGTTGCGGAAAAATTGACAGACCGTGACATTTTGAAAAGATTAGAGTGGACATACGACCCTGAGGTGGAAAAACAAAAATTTAATCAGGATAGTATGGATTATGAAGCGACAGATGATGAGGATTTCGAACATATCTGTAATCAAGGTGATGATGCCAATAAACACAAGCAAGACTCAAGTGCTTGGTGGGAATTACATTCTGATGATAATATCATAAATGAACAATCAAGCAAATGA 1152 0.4184 MVMVLKFRNIFLAVLATNPQTLSSYAALRSGLFVSEFSHSALGNNLQLAPHLTQSSVGIFWDLDNKPPKSFQPYEAATKLKVAVSSFGVVRHMIAYANRYTFSHVPQGVREQRKERKLLNHLENKGVIKPVEPYLCRVCGRKFYTNEKLVNHFRQIHEREHMKRLNQIESAKGSRRAKLVGKYSMKMEKYKNAARDMLTPKVGYGLADELKRAGFWVRTVLDKPQAADIALRDNMVDMMDTRRVDCVVLVSDDSDFLGILKEARLRCLKTVVIGDTDDGLLKRTADAAFSWEEILMGKAKKEAVSVAEKLTDRDILKRLEWTYDPEVEKQKFNQDSMDYEATDDEDFEHICNQGDDANKHKQDSSAWWELHSDDNIINEQSSK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00235 383 ProSiteProfiles Zinc finger C2H2 type domain profile. 134 162 IPR013087 -
Bach2g00235 383 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 48 378 - -
Bach2g00235 383 SUPERFAMILY beta-beta-alpha zinc fingers 132 160 IPR036236 -
Bach2g00235 383 MobiDBLite consensus disorder prediction 346 365 - -
Bach2g00235 383 ProSitePatterns Zinc finger C2H2 type domain signature. 136 157 IPR013087 -
Bach2g00235 383 MobiDBLite consensus disorder prediction 343 365 - -
Bach2g00235 383 Gene3D - 52 295 - -
Bach2g00235 383 CDD PIN_LabA-like 144 275 - -
Bach2g00235 383 Pfam NYN domain 206 286 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00235 Bach-Chr2 3053487 3054638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00235 57 383 C2H2 Transcription Factor Family AT4G12240 60.671 4.16e-146 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach2g00235 NYN 3.3e-07 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00235 - - qsa:O6P43_002577 493.041