Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00209 ATGGGAATGAGAAGGTCGTTGATCTCACCTGCTATGGCTGTGCGCCTGCTCTGGTTGGAGCTGACGCCTAGTCTTTTCTCTGCGTTACCAAAAACCCTGTCTAGTTTCTCCCCAGCACAAACCTTTCTCTCATCAGAGGCACTAATCATAATGGCATTATGCAACAAACTTGGGAATATCTTGAGGCAGAGTGCTGCTCAGAACAAAAAATTACCTTCATCTATGCTCAATTATGTTCGTTGCATGTCATCAAGCAGGCTTTTTGTTGGAGGTCTTTCTTATGGAGTTGACGACCAGTCTCTTAAGGATGCATTTTCCAGCCATGGAGATGTGCTTGAGGCAAGAGTTGTCACTGATAGAGACACTGGAAGGTCTAGGGGATTTGGATTCGTCAACTTTTCGAGCAATGAATCAGCAAGTTCAGCACTTTCTGCTATGGATGGACAGGAGCTAAATGGGCGAAGCATTCGAGTGTCCTATGCTAATGACAGGTCTTCTGGACCTCGAACTGGCGGTGGTGGCTATAGGGGGGATGGAGGTTTTGGTAACCCAACCTATTAAGTCATACTACCTTCTGCATATGTTCATGGCGTTATTGTGGTTATTCTAATCTTTCAAGTTGTGAATTGGGTACTGGTTAAATTCTAT 648 0.4475 MGMRRSLISPAMAVRLLWLELTPSLFSALPKTLSSFSPAQTFLSSEALIIMALCNKLGNILRQSAAQNKKLPSSMLNYVRCMSSSRLFVGGLSYGVDDQSLKDAFSSHGDVLEARVVTDRDTGRSRGFGFVNFSSNESASSALSAMDGQELNGRSIRVSYANDRSSGPRTGGGGYRGDGGFGNPTY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00209 186 CDD RRM2_NsCP33_like 86 161 - -
Bach2g00209 186 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 85 163 IPR000504 GO:0003723
Bach2g00209 186 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 87 157 IPR000504 GO:0003723
Bach2g00209 186 SUPERFAMILY RNA-binding domain, RBD 81 183 IPR035979 GO:0003676
Bach2g00209 186 SMART rrm1_1 86 159 IPR000504 GO:0003723
Bach2g00209 186 MobiDBLite consensus disorder prediction 160 186 - -
Bach2g00209 186 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 63 178 - -
Bach2g00209 186 Gene3D - 62 185 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00209 Bach-Chr2 2636966 2641915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00209 56 172 C2H2 Transcription Factor Family AT2G19380 32.203 1.02e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00209 - - qsa:O6P43_023573 189.889