LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g00199	ATGAAAGAAGTGGTATCAGTTTTCAGGAGCCAGTCATCACAGTCCCGCACAACAAGAAGCTGGGACTTCTTGGATCTTACCTTGGATGACAGTGAAGTGACTCCATTGCAGCTAAGTTATGGTGATGATATCATTGTCGGGGTCTTAGACACAGGTGTATGGCCAGAATCTCCAAGTTTTCAGGGAGATAGCAGTGTGAGTCCTTGTCCATTAACATGGAAGGGAGAGTGTGTTGAAGGTCAGGAATTCGATCCAGCAATGGCATGCAATCAGAAGTTAATCGGTGCTCGTTACTATCTTAAAGGGTTTGAGACAGAATATGGGACACTTAATGTGACCGAAAACTTTGAGTATAGATCAGCTAGAGATTATATTGGGCATGGAACACACACAGCTTCAACTGCAGTAGGGTCCATCGTAGAAAATGCAAATTTCTTTGGTATAGCAAAGGGTAATGCAAGGGGAGGAGCTCCAAGGGCTCGTTTGGCTGTTTACAAAGTATGTTGGAATATTGAGTTTGTTGGAACTTGCTCAGAATCTGATATTCTGGCAGCTTTTGATGATGCTTTGCATGACGGAGTGCACATTATCTCGGTCTCTTTTGGTTCAATGCCACCACTGATTCCTTTCTTCAAAGACAGTGCCAGTATTGGTTCATTCCATGCCATGCAGATGGGTGTAACAGTTGTTTTCTCCGCAGGAAACAACGATGTGTCCCCTGAGCCATCTCTAGTTGGAAATGTTGAACCATGGTCCATATGCGTCGCTGCTTCATCCATTGATAGAACATTCCCCACAAAGATCACCATTGCTGATAATCTTTACATCATGGGAGAAAGTTTCATTACAACACAAGTTACAGGAAGACTGGTGGATGCAATCACGTATTTTGATGACGGGGTATGTGATGTGGGGTACATAACAAACACAAGCTTATCAGCTAAAGGGAGGATACTACTGTGCTTTTCTACAATAGAACCAAAAGTCCTAAGTCTAGAAGCAGCAAGAGCTGCAAATAAAGTGAACGCATCAGGTTTGATCTTTGTTGAACCAATGACAAGGCAGTTACCTGATGTTACTGCTGTTCCAACAGTCCTTGTCAATTTGGAGCAAGGGACTCAAATTAAGCGTGTTCTTGCCGAATCTCGCAAGCTCCCTAGAGTGCAGATAGAAGCAAGCACAACAGTGATTGGGAAGTCACCAGCACCCATAGTTGCATATTTCTCATCTAGAGGACCAAGCTCACTCACCCCTGACATTCTCAAGCCAGATCTGAGTGCTCCAGGAGTGAGCATACTAGCAGCATGGCCTCCTGGAACTCCTCCATCATCAATAAAGGGTGATAAACGTTCTGTGTGTTGGAATTTTCAGTCAGGAACATCAATGTCATGCCCTCATGTATCTGGTGTTGCAGCACTTATTAAATCTGCGCATCCAAACTGGTCTCCCGCTGCCATTAGATCTGCTCTAATCACAACAGCACACACCCTTGACTCAACCTTTGACAGCATCCTAGGTGGTGGATCAATGAAAGCAGCAGATCCCTTTGACATTGGTGCTGGCCACATAAACCCTTCAAAAGCAATTGATCCTGGCTTAGTCTACGACATGAAACCCAGTGACTACATTATTTTCCTCTGCAACATTGGCTTCACCCAAGATCAGATAAAGAGGGTAATACTTCCCTGTCCAGGAACAGAGACAAACTGCCAACGCTTAGCAGCTAAAACTAATTCCTATCTAAATTACCCATCAATCACAGTCTCAAACCTCAGATCCTCAGTAACTCTCAAGAGGACAGTTCGTAATGTGGGCAAGAACAGGAATGCCATATACTTTGCTACCATCATTGCCCCTTGTGGTGTGGAGGTTGAGATATGGCCAAAGATCCTAATTTTCTCATGGTTTAGGGAAGAGAACTCATTCTATGTGACCTTAAAGCCAGTAAAGGAATCACAAGGGAGGTATGATTTTGGAGAGATTGTTTGGTCAGATGGGTTGCATTTTGTTAGGAGTCCTTTGGTTGTGCGCGTGAATACTGCTGCTTCTGATTATGGCGGTTTGAAGCACTCATACTAG	2079	0.4406	MKEVVSVFRSQSSQSRTTRSWDFLDLTLDDSEVTPLQLSYGDDIIVGVLDTGVWPESPSFQGDSSVSPCPLTWKGECVEGQEFDPAMACNQKLIGARYYLKGFETEYGTLNVTENFEYRSARDYIGHGTHTASTAVGSIVENANFFGIAKGNARGGAPRARLAVYKVCWNIEFVGTCSESDILAAFDDALHDGVHIISVSFGSMPPLIPFFKDSASIGSFHAMQMGVTVVFSAGNNDVSPEPSLVGNVEPWSICVAASSIDRTFPTKITIADNLYIMGESFITTQVTGRLVDAITYFDDGVCDVGYITNTSLSAKGRILLCFSTIEPKVLSLEAARAANKVNASGLIFVEPMTRQLPDVTAVPTVLVNLEQGTQIKRVLAESRKLPRVQIEASTTVIGKSPAPIVAYFSSRGPSSLTPDILKPDLSAPGVSILAAWPPGTPPSSIKGDKRSVCWNFQSGTSMSCPHVSGVAALIKSAHPNWSPAAIRSALITTAHTLDSTFDSILGGGSMKAADPFDIGAGHINPSKAIDPGLVYDMKPSDYIIFLCNIGFTQDQIKRVILPCPGTETNCQRLAAKTNSYLNYPSITVSNLRSSVTLKRTVRNVGKNRNAIYFATIIAPCGVEVEIWPKILIFSWFREENSFYVTLKPVKESQGRYDFGEIVWSDGLHFVRSPLVVRVNTAASDYGGLKHSY	692

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g00199	692	CDD	PA_subtilisin_like	268	390	-	-
	Bach2g00199	692	FunFam	Subtilisin-like protease SBT1.5	546	679	-	-
	Bach2g00199	692	Pfam	Fibronectin type-III domain	581	676	IPR041469	-
	Bach2g00199	692	Gene3D	-	546	679	-	-
	Bach2g00199	692	CDD	Peptidases_S8_3	17	495	IPR034197	-
	Bach2g00199	692	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	676	IPR045051	-
	Bach2g00199	692	FunFam	Subtilisin-like protease SBT1.5	43	272	-	-
	Bach2g00199	692	SUPERFAMILY	Subtilisin-like	18	533	IPR036852	GO:0004252\|GO:0006508
	Bach2g00199	692	ProSitePatterns	Serine proteases, subtilase family, serine active site.	459	469	IPR023828	-
	Bach2g00199	692	Gene3D	-	261	397	-	-
	Bach2g00199	692	Gene3D	Peptidase S8/S53 domain	43	542	IPR036852	GO:0004252\|GO:0006508
	Bach2g00199	692	ProSiteProfiles	Serine proteases, subtilase domain profile.	20	529	-	-
	Bach2g00199	692	Pfam	Subtilase family	41	505	IPR000209	GO:0006508\|GO:0008236
	Bach2g00199	692	PRINTS	Subtilisin serine protease family (S8) signature	123	136	IPR015500	-
	Bach2g00199	692	PRINTS	Subtilisin serine protease family (S8) signature	458	474	IPR015500	-
	Bach2g00199	692	PRINTS	Subtilisin serine protease family (S8) signature	41	60	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g00199	Bach-Chr2	2474588	2478669	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g00199	1	682	Subtilisin-like Serine Gene Family	AT4G26330	56.642	0.0	780

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g00199	-		-	qsa:O6P43_022039	997.267