Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00170 ATGGGTTTTCATCACAGAAAACTTCTGCATCTGGAGAATATAAGCCATGCTACCATGGCTTGTGGAAGGAATTGCAGCCCATCACCTTCCCCTCTTTACTCATCAGCAACAACAAAGGGAGGAAACCCCTTTCTTGATCCTCCCATTGTCGCAGATCAAAACCATGTAATCTTAGTGGGTGTGATCGCCATAGCTTGCACGTTTGGCTTAGTGATTTTTCTCGTCAGTGTTTTCAAGATTCTGGCAAACTACCATTCCAGGAGTGAAAATCTCAGGAGAAGCAATCTGCCCATATTGTTCGATGTCCATGGAGATTTTCCTTTCTCAGATGATGATGATGATGAGGAGCATGCCATTTACCACCCCATATGGTCCATCAACACAGTGGGTCTTCAGCAATCAGTAATCGATTCTATCACAGTCTGTAAATACAAAAAAGACGATGGATTAATAGAGGGAACAGAGTGTTCTGTTTGTCTCTCTGAGTTTCAAGAAGATCAAAGTCTCCGACTTTTGCCTAAATGCAGCCACGCCTTTCACATACCTTGCATTGATACTTGGCTGAGATCGCATAAAAATTGTCCCTTGTGTCGTGCTCCTGTAATTGCAGAAACAGCTGATGCAGTTACAGAAGGAAATAGGGTTGAGCCAAGTTCGAATTTTTCCGGCGTAAGCCAAAATACCCAGATGGAAAACTTGGAATATGAACGCATGGAAGAAGGAGGAAGCAGTGGGGTGAGGATTGGAGACGATGATTCCAATTCTGGTATGTTTCAGATCGATGACAGAAGGGATGCTTCAGACCCAGATAAAAATTTGGCAAATTCTGGAATTCTAATGGATTCAACGTTGATTCAGCAGCAAGTGGAAGAGGAAATACAGCAGCAACCTGTGAGAAAGTCAGTTTCAGTGGATTCACCTGTTTCTGCAATGATATATCGTGCTTTGGTGGTTTCGAATTCTGATATAGAAAACGCAGATACCCATTTGGATTATAAGAGAAATTCAAGCAGCAAGATTGTGGATGCCATTGCTAAGCAAGGTTCTCCAAACAGGTCCAAAGGATGTTCATTGAAGAAGAGGCCCATATCAATGAAACGATCATTTTCTCATAACAGAAAACTCCAATTATCCAGACATTGTAGGAGCCAGAGCTCAACCCTGCCCTTATGA 1173 0.4254 MGFHHRKLLHLENISHATMACGRNCSPSPSPLYSSATTKGGNPFLDPPIVADQNHVILVGVIAIACTFGLVIFLVSVFKILANYHSRSENLRRSNLPILFDVHGDFPFSDDDDDEEHAIYHPIWSINTVGLQQSVIDSITVCKYKKDDGLIEGTECSVCLSEFQEDQSLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPVIAETADAVTEGNRVEPSSNFSGVSQNTQMENLEYERMEEGGSSGVRIGDDDSNSGMFQIDDRRDASDPDKNLANSGILMDSTLIQQQVEEEIQQQPVRKSVSVDSPVSAMIYRALVVSNSDIENADTHLDYKRNSSSKIVDAIAKQGSPNRSKGCSLKKRPISMKRSFSHNRKLQLSRHCRSQSSTLPL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00170 390 SMART ring_2 156 197 IPR001841 -
Bach2g00170 390 Pfam Ring finger domain 155 198 IPR001841 -
Bach2g00170 390 SUPERFAMILY RING/U-box 140 203 - -
Bach2g00170 390 PANTHER RING-H2 FINGER PROTEIN ATL16 56 350 IPR044600 GO:0016567|GO:0016740
Bach2g00170 390 CDD RING-H2_EL5-like 155 198 - -
Bach2g00170 390 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 207 IPR013083 -
Bach2g00170 390 ProSiteProfiles Zinc finger RING-type profile. 156 198 IPR001841 -
Bach2g00170 390 MobiDBLite consensus disorder prediction 256 270 - -
Bach2g00170 390 FunFam RING-H2 finger protein ATL54 131 204 - -
Bach2g00170 390 MobiDBLite consensus disorder prediction 239 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00170 Bach-Chr2 2135486 2136658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00170 58 201 C3H Transcription Factor Family AT1G72220 48.684 5.13e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00170 - - cill:122303667 285.804