Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00168 ATGAAGGAAGCCTATCGTCGTACCACTTTCGGGGAACGCTCGAATTTCGACCGGAGAACTTACGGTCCCGGAACTTTCCGGGGCCGTGTCCATAATTCTTACAATCACCGTCAAACAGAGCATGTCGACCGCTCGCCGGGACATATTTCCCCTCGCCGCTGCGCCAATTTCGTCGTCGAACTTCGCTTTGGTTGCGGTCGCTTCAGCAGGGAATATGTGGAGTCCTTAGTCGCAGAGTGCATGCCCAAGGCCGATAATTTTTGTTTTTACCCGAGTGATCATGTTATCGGTGCCCTGCAATTTAGCCAGTGGGTCGACGCACTTGACGCCATTGTCTGCCTATGGAAATCTCGCCTCAATGAAGTTCATAATTTCATCCCGGAACTCTCGTCTTACGTTCTCGTGCCTTCCGACGAGGACGAGGTACAGGACCGCCTCCGGTCACTTTTTGCCAGTCATGTTAAGAGCCTCATGGAAGGAAAGGAAGTAAAGATGTGGCTCCAGAAAATTGAGTCAATCTCGAAAGAAATTAAGAATGTTTCGGGTTTGCTTGCGAAGCCCAAGCAAATTCGACTGTTGAACGAACTCCGACAAAAGAGACAGGGCCTTGAAGATGAGAAACTGCTGATTGAAAGGAGAGTAAAGGAGTTTCAGACTGCAATGAAGTGTATATTGCAATATGTCGAGGAGAACATGAAGAAAGCTGACGAGAATGTTTTTCCGATATTTAAACTTGATGGAGGCATGGATTGGAAGCGGGTTCATAGCTTGATAAAAAGGGAGCGGCGCCGACTTGAGGAGGGGTTGCCAATTTATGCATACCGGCGGGATATTCTTGAAGCAGTTCATGTTCAACAGATAACGGTATTAATTGGAGAGACTGGTTCAGGGAAAAGCACCCAGTTGGTACAGTTTCTGGCTGATTCAGGCATTGGTGCTGACAAGTCCATCATATGCACCCAGCCTCGCAAGATTGCTGCCAAATCTCTGCATTACATGAATGATAAGAATTTGTCTGGGATCTCATGCATCATAATTGATGAAGCTCATGAAAGGAGCCTAAATACAGATCTTCTATTGGCATTGATCAAGGGTTTACTCTGTAGAAGGGTTGAAATGAGGCTAATAATTATGTCTGCCACAGCTGATGCAAAGCAGCTATCTGACTACTTCTATGGTTGTGGTGTTTCTCATGTTGTTGGGAGAAACTTTCCAGTTGAGGTTGTATATGTTCCTTGTGAATCTTCTGCATATTCTGGTTCTGCTGTTGTTGCTTCATATGCTTATGATGTTGTGAGGATGGCGACTGAGATTCATAAAACAGAGAAAGAGGGAACTGTTCTTGCCTTTTTAACCTCTCCAGCAGAAGTGGAATGGGCTTGTGAAAAGTTTGCAGCTCCCTCTGCAGTTGCGTTGGCCTTACATGGAAAACTTTCTTCTGAAGAGCAATTTCGTGTTTTCCAGAACTACCCTGGGAAAAGAAAAGTAATCTTTGCGACTAATCTTGCTGAGACGTCATTGACAATTCCTGGGGTCAAGTATGTGGTAGATTCTGGATTGGTTAAAGATAGTAGATTTGAACCTGGCAGTGGTATGAATGTTCTTAGAGTTTGCTGGACCAGTCAGAGCTCTGCTAATCAACGGGCTGGTCGTGCAGGGAGGACTGAGCCTGGCAGGTGCTATAGACTCTACTCTGAATCTGATTATGAGTGTATGGCACCTAATCAAGAACCTGAGATTCGACGAGTTCATCTTGGAATAGCAGTTTTGAGGATCCTTTCCTTGGGAATAAAGAATGTACAGGAGTTTGAGTTTGTAGATGCTCCAAGTCCCAGTGCTATTGACATGGCAATCAGGAATCTAATTCAATTGGGAGCAATTAGACTAAACAATTCTTTTCATGAATTAACTGATGAAGGTAGGTTCCTGGTGAAAATGGGCATTGAGCCAAGGCTTGGTAAACTTATTATTGGATGCTTCAGACATAAGTTGGGTAAAGAAGGCCTTGTCCTTGCTGCTGTTATGGCCAATGCCAGTAGCATATTTTGCAGAGTTGGTAGTTATGATGATAAGCGAAGATCTGATTGCCTTAAGGTGCAATTTTGCCATAGCAATGGTGACCTTTTCTCTCTTCTTTCTGTGTACAAGGAATGGGAAGCCTTGCCTCTAGAGTGGAAGAATAAATGGTGTTGGGAAAACAGCATCAATGCCAAATCCTTGAGGAGATGCCGAGACACAATTGTGGAACTGGAACTTTGCCTTCAGCATGAACTTAATTGTATTATTCCAACTTACTGGCAGTGGGACCCTCATAGGTCCACTGATCACGATAAGTGTCTGAAAGAGGTTATACTGTCCTCACTTGCTGAAAATATTGCCATGTACTCTGGATGTGACCAACTCAGTTATCAAGTGGCATCAACTGGACAACATGTTCAACTACATCCATCTTGTTCCTTGCTAATGTTTGCACAAAAACCTAGTTGGGTTGTTTTTGGTGAGCTCCTTTCAGTTTCCAACCAATATTTGGTCTGTGTCAGTGCCTTTGAATATGAATCATTGTGGTCCCTTTACCCTCCTCCCTTATATGATCTTTCCAAGATGGAAAGGATGAAGTTGCAAATGAGGGTGTTGACCGGTTTTGGCAGTATTCTGCTCAAGAGGTTTTGTGGGAAAGCCAACAGTAATCTGCTTGGTCTTATATCACGCATTCGAACAGCTCGTATGGATGAACGGATCTCCATTGAAGTCAACATTGCCCAGAATGACATTCGATTATATGCAGCTTCACATGACATGGAAGTGGCCCTTGAGTTGGTTAATGATGTTTTAACATATGAGAGAAAAATGTTACACAGTGAATGCATGGAGAAATGCCTGTATCATGGTTCTGGTGTCTCACCTTCAGTAGCTTTGTTTGGATCAGGGGCTGAGATAAAGCATTTAGAACTTGATAAGCAGTGGTTGAGTGTTGATATATGTCATCCTGACGTTAATGGAGTTGATGATAAGGAGCTCTTGATGTTTCTCGAGAAGAATACCTCAGGTAGCATCTGTGCTGTGCACAAGTTTACAGGCACAGTGCAGGATGCTGAAGATAGAGAAAAGTGGGGCAGAATAACGTTTCTCTCCCCTGACACTGCCAAAAGAGCTGTTGAGCTAGATGGAGTGGACTTTCATGGCTCCTTGAAAATAGTTCCTTCGCAGACAACCAATGGAGGGGATAAGACATTCTCATTTCCTGCTGTTAAAGCTAAAATTTATTGGCCTCGTAGGCCAAGCAAAGGATTTGGCATAGTAAGATGCAACACACAGGATGTTGATTTCATCTTGAGAGATTTTTATGACCTTAAAATTGGAGGAAGGTATGTTCGATGTGAAGCTAGCAGGAGGTACCCCGATAGTGTTACGATTGGTGGGCTTGATAAAGAACTCTCTGAAGCTGAAATTTTAGATGTTTTAAGAACTGTAACGAATCGGAGGATTCTGGATTTTTTCTTGGTGAGAGGAGAAGCTGTTGGGAATCTGCCATGTGCTACTTGTGAAGAGGAACTCCTAAAAGAAATTTCTCCTTTAATGCCAAAAAGAAATCCTCACACAAACTCTTGCCGAGTTCAGGTATTTTCACCTGAGCCAAAGAATGTTTTCATGAGAGCTTTGATCACCTTTGATGGAAGATTACATCTGGAGGCAGCAAAAGCTTTGGAGCAAATTGAAGGGAAGGTGTTGCGTGGATGCATGTCGTGGCAAAAGATAAGATGTCAGCGGTTGTTTCATAGCTCCTTGACATTCCCTGTTCCTGTGTATCGTGTTATTAAGGAACAACTGGATAAAATTTTTGCAAGCTTTAGCTCTATGAATGGTCTTGAGTGGAACATGGAAAGGACAGCTAATGGTTCCCATCGAGTGAAGATAACAGCCAATGCAACAAAGACAGTGGCAGAAGTTAGGAGACCTCTGGAAGAACTCGCAAGAGGAAAGACTATTGACCACCACAGCCTCATTCCTACAGTTCTACAGGTTCTGTTGTCCAGAGATGGCATTAGTCTTAAAACCTCAATACAGCAGGAGACAGGAACTTACATTCTTTTTGACAGGCACAGCCTAATGCTTCGGGTGTTTGGTTCTCCAGAGAAGGTTTCTGAGGCCCAGCAGCAGCTGATTCAATCCCTACTCTCTCTTCATGAAAGCAAGCAGCTAGAAATCCATCTTCGAGGGAGAGATCTTCCTTTTGACCTAATGAAGCAAGTAGTTAAGAACTTTGGACCTGATCTTCGAGGGCTAAAAGAGAAGGTGCCTGAGGCCGACTTTACCCTCAACACACGCCGCCAGATAATCTCTTTTCAGGGTAACAGGGAGTTGAAACCTAAAGTAGAGGAAATAATTGATGAGATTGCTCGATCAGGACAATGTTTGACTGAGAAACCTAGGACTGGACCAGATTGCCCAATTTGCTTGTGTGAGATTGAAGAAGGATATCAACTTGAAGGCTGTGGTCATTTGTTCTGCCGGTTTTGTCTAGTAGAGCAATGTGAATCTGCTATAAGAAATCAAGGTAGTTTCCCAGTGTGCTGTGCTCGTGAGGGCTGTGGGCAACCCATTCTGCTTACAGATTTGAGATCTCTCCTGTTAAATGACAAGTTGGAGGAACTTTTCAAAGCTTCTTTGGGAGCTTTTGTAACATCTAGTGGGGGCACTTACAGGTTTTGCCCGACCCCTGACTGCCCTTCAATTTATCGAGTTGCAGATCCTGGGATTGGTGGTGAGCCATTTGTTTGTGGAGCATGCTACGCAGAAACTTGTACCATGTGCCACTTGGAGTATCATCCTTATCTTTCATGTGAGAGATACCGGGAGTTCAAAGAAGATCCAGACTCATCTTTGAAGGAATGGTGCAAAGGGAAAGAGCATGTTAAGAGCTGCCCTGCATGTGGATATACAATAGAGAAGGGAGATGGGTGCAACCATATTGAGTGCAAATGTGGGAAACATGTATGCTGGGTTTGTTTGGTGTTCTTTGGAACTAGTGATGAATGCTATAACCATTTAAGAAGTATACACATGGCGATTATATAA 5076 0.4374 MKEAYRRTTFGERSNFDRRTYGPGTFRGRVHNSYNHRQTEHVDRSPGHISPRRCANFVVELRFGCGRFSREYVESLVAECMPKADNFCFYPSDHVIGALQFSQWVDALDAIVCLWKSRLNEVHNFIPELSSYVLVPSDEDEVQDRLRSLFASHVKSLMEGKEVKMWLQKIESISKEIKNVSGLLAKPKQIRLLNELRQKRQGLEDEKLLIERRVKEFQTAMKCILQYVEENMKKADENVFPIFKLDGGMDWKRVHSLIKRERRRLEEGLPIYAYRRDILEAVHVQQITVLIGETGSGKSTQLVQFLADSGIGADKSIICTQPRKIAAKSLHYMNDKNLSGISCIIIDEAHERSLNTDLLLALIKGLLCRRVEMRLIIMSATADAKQLSDYFYGCGVSHVVGRNFPVEVVYVPCESSAYSGSAVVASYAYDVVRMATEIHKTEKEGTVLAFLTSPAEVEWACEKFAAPSAVALALHGKLSSEEQFRVFQNYPGKRKVIFATNLAETSLTIPGVKYVVDSGLVKDSRFEPGSGMNVLRVCWTSQSSANQRAGRAGRTEPGRCYRLYSESDYECMAPNQEPEIRRVHLGIAVLRILSLGIKNVQEFEFVDAPSPSAIDMAIRNLIQLGAIRLNNSFHELTDEGRFLVKMGIEPRLGKLIIGCFRHKLGKEGLVLAAVMANASSIFCRVGSYDDKRRSDCLKVQFCHSNGDLFSLLSVYKEWEALPLEWKNKWCWENSINAKSLRRCRDTIVELELCLQHELNCIIPTYWQWDPHRSTDHDKCLKEVILSSLAENIAMYSGCDQLSYQVASTGQHVQLHPSCSLLMFAQKPSWVVFGELLSVSNQYLVCVSAFEYESLWSLYPPPLYDLSKMERMKLQMRVLTGFGSILLKRFCGKANSNLLGLISRIRTARMDERISIEVNIAQNDIRLYAASHDMEVALELVNDVLTYERKMLHSECMEKCLYHGSGVSPSVALFGSGAEIKHLELDKQWLSVDICHPDVNGVDDKELLMFLEKNTSGSICAVHKFTGTVQDAEDREKWGRITFLSPDTAKRAVELDGVDFHGSLKIVPSQTTNGGDKTFSFPAVKAKIYWPRRPSKGFGIVRCNTQDVDFILRDFYDLKIGGRYVRCEASRRYPDSVTIGGLDKELSEAEILDVLRTVTNRRILDFFLVRGEAVGNLPCATCEEELLKEISPLMPKRNPHTNSCRVQVFSPEPKNVFMRALITFDGRLHLEAAKALEQIEGKVLRGCMSWQKIRCQRLFHSSLTFPVPVYRVIKEQLDKIFASFSSMNGLEWNMERTANGSHRVKITANATKTVAEVRRPLEELARGKTIDHHSLIPTVLQVLLSRDGISLKTSIQQETGTYILFDRHSLMLRVFGSPEKVSEAQQQLIQSLLSLHESKQLEIHLRGRDLPFDLMKQVVKNFGPDLRGLKEKVPEADFTLNTRRQIISFQGNRELKPKVEEIIDEIARSGQCLTEKPRTGPDCPICLCEIEEGYQLEGCGHLFCRFCLVEQCESAIRNQGSFPVCCAREGCGQPILLTDLRSLLLNDKLEELFKASLGAFVTSSGGTYRFCPTPDCPSIYRVADPGIGGEPFVCGACYAETCTMCHLEYHPYLSCERYREFKEDPDSSLKEWCKGKEHVKSCPACGYTIEKGDGCNHIECKCGKHVCWVCLVFFGTSDECYNHLRSIHMAII 1691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00168 1691 PANTHER ATP-DEPENDENT RNA HELICASE 257 330 - -
Bach2g00168 1691 Pfam Helicase conserved C-terminal domain 438 555 IPR001650 -
Bach2g00168 1691 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 331 400 IPR014001 -
Bach2g00168 1691 CDD DEXHc_RHA-like 286 399 - -
Bach2g00168 1691 MobiDBLite consensus disorder prediction 14 33 - -
Bach2g00168 1691 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 342 351 IPR002464 -
Bach2g00168 1691 Gene3D - 403 575 IPR027417 -
Bach2g00168 1691 Pfam Helicase associated domain (HA2) 617 694 IPR007502 GO:0004386
Bach2g00168 1691 Gene3D - 1610 1688 - -
Bach2g00168 1691 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1479 1558 IPR013083 -
Bach2g00168 1691 Gene3D - 332 402 IPR027417 -
Bach2g00168 1691 Gene3D - 249 331 IPR027417 -
Bach2g00168 1691 ProSiteProfiles Zinc finger RING-type profile. 1482 1524 IPR001841 -
Bach2g00168 1691 FunFam ATP-dependent RNA helicase DEAH12 chloroplastic 403 575 - -
Bach2g00168 1691 CDD SF2_C_RHA 404 564 - -
Bach2g00168 1691 ProSiteProfiles TRIAD supradomain profile. 1478 1686 IPR044066 -
Bach2g00168 1691 SUPERFAMILY RING/U-box 1565 1619 - -
Bach2g00168 1691 SUPERFAMILY RING/U-box 1636 1683 - -
Bach2g00168 1691 SMART ibrneu5 1546 1614 IPR002867 GO:0008270
Bach2g00168 1691 SMART ibrneu5 1615 1679 IPR002867 GO:0008270
Bach2g00168 1691 ProSitePatterns Zinc finger RING-type signature. 1498 1507 IPR017907 -
Bach2g00168 1691 Pfam IBR domain, a half RING-finger domain 1555 1614 IPR002867 GO:0008270
Bach2g00168 1691 CDD Rcat_RBR_DEAH12-like 1638 1687 - -
Bach2g00168 1691 CDD BRcat_RBR 1566 1617 - -
Bach2g00168 1691 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 430 596 IPR001650 -
Bach2g00168 1691 Coils Coil 186 213 - -
Bach2g00168 1691 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 578 621 - -
Bach2g00168 1691 SUPERFAMILY RING/U-box 1481 1546 - -
Bach2g00168 1691 SMART helicmild6 458 556 IPR001650 -
Bach2g00168 1691 SMART ha2_5 616 712 IPR007502 GO:0004386
Bach2g00168 1691 SMART ultradead3 267 409 IPR014001 -
Bach2g00168 1691 FunFam ATP-dependent RNA helicase DEAH12 chloroplastic 1610 1688 - -
Bach2g00168 1691 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 780 857 IPR011709 -
Bach2g00168 1691 Gene3D - 578 621 IPR042035 -
Bach2g00168 1691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 265 795 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00168 Bach-Chr2 2119638 2125958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00168 1498 1669 ARIADNE family AT3G27710 29.143 4.35e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00168 K12818 - gmx:100810008 2425.97