Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00166 AGCCCTCCTCCCTTCCCCTTCCCCTTCCCCCCTCCCCCTTCCCCTGCCTTCTTCCACTGTATATGAACAACCATAGACTATTTATGCAGAGAGAGGTAGAGTTCAGTGAGAAAGCTAGTTAATTGGTTACTTTCTCTTGCTGGGTTGGGCTTTGTAGAATTCTGGACAAAATTTTCTTCCTTGCTTTTCTTGATTCTGTTGATGGGTAAAGAGGGAGAGGAAGTAGTGAAAAAGAAGGAAGACGGTGGCCTACATGGCGATGACAGGTCGTATGGTTGCCTGATACAGTACAGTTCAAAGTTGTGCTGTTTAAGATATGAGAATTCCTTTTTAGGGGTTCCTTTTAAGTGAAAATTCTTGTCCTTTGCTTTCCTTGAGATCTTAAATAAGATCAAATTAATACATTAATCACAACAAGAGGACCTTGATCTAATAAGATCTGTGCAGAATTCTGAATTCTTCTTCATCCACTTTCATGAAGATGAAGAGACTTGGCAGCTCAGATTCTATGGGTGCCCTCATCACCATCTGTCCATCCACAGACGAACACAGTCCGAGGAACAATCATGTGTATGGTAGGGAGTTCCAATCCATGTTGGATGGACTAGATGAGGAAGGCTGCGTTGAAGAATTGGGCAACCCCTCTGAGAAGAAACGGAGACTTAGTGTTGATCAAGTCAAGGCCTTGGAGAAGAACTTCGAGGTAGAGAATAAGCTTGAACCTGAGAGGAAGGTGAAGCTTGCTCAAGAGCTTGGCCTGCAGCCTAGACAAGTTGCTGTTTGGTTCCAAAACCGCCGAGCTAGATGGAAAACCAAGCAAATGGAAAGAGATTATGGCGTTCTCAAAGCCAGTTATGAAGCTCTCAAGCTCAACTATGACTCTCTCCAACGTGACAATGAAGCTCTACGCAAGGAGATTAAGGAATTGAAATCAAGAGTGCGAGAAGATAACACTGAAAGTGATGTTTCAGTGAAGGAAGAGATAAATCAGCTGCCTGATTCCGACGAGAAAATGATCGAACGTAGTATTGAAACCTCCATTCCTGGATCCGAGTCCAACAAGGACGACTTCAACTACGATTGCTTCAACAGCAGCAGCAAGCGAGTGGGTGCCGCCGCACTCTTCACAGTGGACTTCAAAGACGGCGCTTCAGACAGCGACTCTAGTGCAATCTTAAACGAGGATAACAGCCCGAACGCCGCCATTTCTTCATCTGGGATCCTTCAGAATTCCCAGATTTTGATGTCTCCTCCTGGCTCGTCTTCTCTCAAATTCAATTGTTCCCCATCTTCATCACCCTCCTCCATGAACTGCTTCCAATTTCAGAGAACATACCCACCGCAATACGTGAAGATGGAAGAGCACAATTTCTTCAGCGCAGACGAGGCCTGCAATTTCTTCTCCGATGAGCAAGCACCAACCCTCCAGTGGTACTGCTCGGACCAATGGAGTTAACCCAAAAAAAAACCACCTTGGCAAATTTTACTGTTGATCAAAGAGAACCGAAATAAGGAGAAAAACAGAGAAGAGAAGATAAATGGTGGGTATCCAAGAATTTTGTAAAAATTGGAAAGTACAGTATTAAGCTTAATGCTGCCTAAGATGATGAGGATAGCGAAGCTGAGAGAAACTGTAAAAAAAGTTGGAAGAAGAAGAACCGGGTTGGGTAAAAGGCTGACGTATAAGGGTATTTATGACTCTGTTGGGGTCCGTGCGGGAAGGGAAATAATAATGATTAGATAGTAATTGAAATCTATGCATGTAAAAATCTTCGCA 1777 0.4389 MKRLGSSDSMGALITICPSTDEHSPRNNHVYGREFQSMLDGLDEEGCVEELGNPSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQMERDYGVLKASYEALKLNYDSLQRDNEALRKEIKELKSRVREDNTESDVSVKEEINQLPDSDEKMIERSIETSIPGSESNKDDFNYDCFNSSSKRVGAAALFTVDFKDGASDSDSSAILNEDNSPNAAISSSGILQNSQILMSPPGSSSLKFNCSPSSSPSSMNCFQFQRTYPPQYVKMEEHNFFSADEACNFFSDEQAPTLQWYCSDQWS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00166 324 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 49 297 IPR045224 GO:0003700
Bach2g00166 324 SMART HOX_1 55 116 IPR001356 GO:0003677
Bach2g00166 324 Pfam Homeobox associated leucine zipper 112 153 IPR003106 GO:0006355|GO:0043565
Bach2g00166 324 SUPERFAMILY Homeodomain-like 40 114 IPR009057 -
Bach2g00166 324 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Bach2g00166 324 FunFam Homeobox-leucine zipper protein HAT5 51 114 - -
Bach2g00166 324 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Bach2g00166 324 Gene3D - 52 119 - -
Bach2g00166 324 Coils Coil 125 159 - -
Bach2g00166 324 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Bach2g00166 324 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Bach2g00166 324 CDD homeodomain 57 113 IPR001356 GO:0003677
Bach2g00166 324 Pfam Homeodomain 57 110 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00166 Bach-Chr2 2084526 2086677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00166 1 323 Homeobox Transcription Factor Family AT2G22430 48.424 6.83e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach2g00166 Homeodomain 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00166 K09338 - qsa:O6P43_030496 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g00166 2 2084526 2086677 Bach2g00166 2 2084526 2086677 ECH