Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00157 ATGGAGGAGGAAGAACACGAGGTATACGGAGGCGAGATCCCAGACGTGGGAGAAATGGAAGGAGACCTGGATTCTCACCATGCCGATGTCGACATGTCTGGTGCCGATGACGATGCCGTCAAGGAGCTTGATGAGATGAAGAAGAGACTGAAGGAAATGGAAGAGGAAGCTGCAGCTCTCCGTGAAATGCAGGCTAAGGTTGAAAAGGAGATGGGTGCAGTTCAAGATCCTGCTAGTGCGGCTGCTTCTCAGGCAAGCAAGGAGGAGGCAGATACTCGATCTGCTTTCGTTGGCAATGGTCACTCTTATTACTCAAGTTCTATAATTAGGGCTGGGATGCTTACATTGTATTTTGTGGATGGGCAAATGCATCTCATGGAGATGGCTGAACTGGAACAGCTGGAGGTAGAATGTGTTAAAGATGCTTCAACTTCAGTACACAGGAAGGCAGCTTGTGGTTCTTTGGAAGAGCATTCTGTTGATTATGCATGCACACCTGAAGAAGTACAGCAACATTTCCAATCATGTGGTACGGTGAACAGGGTTACTATCCTTACAGACAAGTTTGGCCAGCCTAAAGGTTTTGCGTACGTGGAATTTCTTGAAGCTGAAGCTGTTCAAGAGGCAATCCTTTTGAATGAATCTGAATTACATGGCCGTCAATTGAAGGTTTTGCCTAAGAGGACAAATGTTCCTGGAATGAAACAATATCGTCCTAGACGTTTCAATCCTTACACGGCTTACCGCTCCAGGAGGCCATATCCTCCTCCGTACTTCTACTCTCCTTATGGATATGGGAAGGTTCCAAGATTCAGAAGGCCATCACGCTACATGCCTTACTATTAGAAGACCTATATGTATGATGTTAATGATATGTCAGTGGATGTAGTTTGAAATGGATCCTGTAACTTTCTCGATTTCATGAAGTAAGAGTGAGAATAGAAAAGAGGCCAAAGAGAGTTCATTTTCTCGCTCTATCCTCTCTTTTGTTCTCATTTTTACTGCACAAAATTAGAAAAGTTAAAGTATCTATGCTCATAATTTCATTTGGAGAGCATTTAGAAACTCGTGTATTATCTTTCATCCCCATTTTGTACCCTATAGGATTCGGAAGAACGTTTCTTTTCCCTTTAACATTAAGGCTGTGGTACTGATTTTGTGTTTCTTGCCTAATGGCCGGC 1181 0.4344 MEEEEHEVYGGEIPDVGEMEGDLDSHHADVDMSGADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAASQASKEEADTRSAFVGNGHSYYSSSIIRAGMLTLYFVDGQMHLMEMAELEQLEVECVKDASTSVHRKAACGSLEEHSVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYTAYRSRRPYPPPYFYSPYGYGKVPRFRRPSRYMPYY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00157 281 CDD RRM_II_PABPs 160 225 - -
Bach2g00157 281 SMART rrm1_1 149 225 IPR000504 GO:0003723
Bach2g00157 281 Coils Coil 36 70 - -
Bach2g00157 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 148 229 IPR000504 GO:0003723
Bach2g00157 281 MobiDBLite consensus disorder prediction 19 35 - -
Bach2g00157 281 SUPERFAMILY RNA-binding domain, RBD 160 252 IPR035979 GO:0003676
Bach2g00157 281 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 26 245 - -
Bach2g00157 281 MobiDBLite consensus disorder prediction 69 93 - -
Bach2g00157 281 Gene3D - 129 233 IPR012677 -
Bach2g00157 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 161 223 IPR000504 GO:0003723
Bach2g00157 281 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00157 Bach-Chr2 1968360 1973156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00157 129 224 Eukaryotic Initiation Factors Gene Family AT2G36660 31.959 1.12e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00157 K14396 - apan:127242265 249.595