Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00140 GTTTAATCAGTTATCTGCCGTTGCCGTTGGATATCTGAATCATGAAGATGCCAAATTCGAACGGAGTTTTCCAAATCCCGTCGGCACATGCCGTGACCCGAATAGCGCATGGGCAAGATTCGAATAGGAGCGCTGACCCTCTGGTTCCCCTCCGGAATCTGCTCGTGGTCAGAACGAGAATGGATTCGCTGCAAAGCTTCTTATCCGAATCCATCAATAGCCACACTCTGGTTAGCAAGGATCAGATGGATATGGTCTCCAACGAGATCGTTTCTGCCGTCCACCAGATAATCGTCAACGGCACTGCTCTCGTGTCCGCCGGAGCATCCATGAAATTACCCGGTTCGCCGGATATGGTACCTTGTAAGAAACCACGGTTGGATTCTTCAGGTACCGAAAAGGGCAAACATGGGTTTGATTTGAAAGTTGAAGTTTTAGACGAGGAGGATGGTGAAGATTGTGAGGATGATTGTGAAATCGTGGAGCTAGACGCCATGCAATTGCTGGTGGAGCACATTCATTTCTGTGAAATTTGCGGGAAAGGGTTCAGACGCGATGCCAATTTGCGGATGCACATGCGTGCTCACGGAAATCAATTCAAGACCCCGGAAGCGTTGGCGAAACCCTCAGAGAAATTCGAGGGCACTCGTCGTAGAGCAACGCGATTTTCTTGCCCATTCGAAAGTTGCAACCGGAACAAGTCCCACAAGAAATTCCGGCCATTAAAGTCGATTATTTGCGTAAAGAACCATTTCAAAAGGAGTCACTGCCCAAAAATGTATTCATGTAATAGGTGCCACAAGAAGAATTTCTCGGTACTTTCAGATTTGAAGAGCCATCAGAAGCATTGTGGGGAATCTAAGTGGAAGTGCTCGTGTGGAACCACCTTTTCCAGGAAGGATAAGCTGTTTGGGCACATATCCTTGTTTGAAGGGCACATGCCGGCTCTTGCTCCCGATGAAGAAGAAAAAGGAAAGCCAGTGATGGGCATGGAGTCAGAGGAAAGGGATAGAATGTTGAAAGAAGGAGATTTGGGGGCTAATTGTTTTCATGATGGGTTACCAGACGGATTCTTCGAGGAAATAGATGCTTTTGGCTCAATTGAGAACTACTGTTTGCAAGATGCTTTCCATTCTTAAATGAAGATGCCAAATTCGAACGGAGTTTTCCAAATCCCGTCGGCACATGCCGTGACCCGAATAGCGCATGGGCAAGATTCGAATAGGAGCGCTGACCCTCTGGTTCCCCTCCGGAATCTGCTCGTGGTCAGAACGAGAATGGATTCGCTGCAAAGCTTCTTATCCGAATCCATCAATAGCCACACTCTGGTTAGCAAGGATCAGATGGATATGGTCTCCAACGAGATCGTTTCTGCCGTCCACCAGATAATCGTCAACGGCACTGCTCTCGTGTCCGCCGGAGCATCCATGAAATTACCCGGTTCGCCGGATATGGTACCTTGTAAGAAACCACGGTTGGATTCTTCAGGTACCGAAAAGGGCAAACATGGGTTTGATTTGAAAGTTGAAGTTTTAGACGAGGAGGATGGTGAAGATTGTGAGGATGATTGTGAAATCGTGGAGCTAGACGCCATGCAATTGCTGGTGGAGCACATTCATTTCTGTGAAATTTGCGGGAAAGGGTTCAGACGCGATGCCAATTTGCGGATGCACATGCGTGCTCACGGAAATCAATTCAAGACCCCGGAAGCGTTGGCGAAACCCTCAGAGAAATTCGAGGGCACTCGTCGTAGAGCAACGCGATTTTCTTGCCCATTCGAAAGTTGCAACCGGAACAAGTCCCACAAGAAATTCCGGCCATTAAAGTCGATTATTTGCGTAAAGAACCATTTCAAAAGGAGTCACTGCCCAAAAATGTATTCATGTAATAGGTGCCACAAGAAGAATTTCTCGGTACTTTCAGATTTGAAGAGCCATCAGAAGCATTGTGGGGAATCTAAGTGGAAGTGCTCGTGTGGAACCACCTTTTCCAGGAAGGATAAGCTGTTTGGGCACATATCCTTGTTTGAAGGGCACATGCCGGCTCTTGCTCCCGATGAAGAAGAAAAAGGAAAGCCAGTGATGGGCATGGAGTCAGAGGAAAGGGATAGAATGTTGAAAGAAGGAGATTTGGGGGCTAATTGTTTTCATGATGGGTTACCAGACGGATTCTTCGAGGAAATAGATGCTTTTGGCTCAATTGAGAACTACTGTTTGCAAGATGCTTTCCATTCTTAATACTGCTGTTACTCATGGAGGACTTCAATAACTTTTGCGCTGTCGTGGACT 2288 0.4703 MKMPNSNGVFQIPSAHAVTRIAHGQDSNRSADPLVPLRNLLVVRTRMDSLQSFLSESINSHTLVSKDQMDMVSNEIVSAVHQIIVNGTALVSAGASMKLPGSPDMVPCKKPRLDSSGTEKGKHGFDLKVEVLDEEDGEDCEDDCEIVELDAMQLLVEHIHFCEICGKGFRRDANLRMHMRAHGNQFKTPEALAKPSEKFEGTRRRATRFSCPFESCNRNKSHKKFRPLKSIICVKNHFKRSHCPKMYSCNRCHKKNFSVLSDLKSHQKHCGESKWKCSCGTTFSRKDKLFGHISLFEGHMPALAPDEEEKGKPVMGMESEERDRMLKEGDLGANCFHDGLPDGFFEEIDAFGSIENYCLQDAFHS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00140 365 Gene3D Classic Zinc Finger 234 302 - -
Bach2g00140 365 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 133 319 IPR044300 GO:0010044|GO:0010447
Bach2g00140 365 SMART c2h2final6 209 242 IPR013087 -
Bach2g00140 365 SMART c2h2final6 160 182 IPR013087 -
Bach2g00140 365 SMART c2h2final6 247 269 IPR013087 -
Bach2g00140 365 SUPERFAMILY beta-beta-alpha zinc fingers 157 183 IPR036236 -
Bach2g00140 365 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 187 IPR013087 -
Bach2g00140 365 ProSitePatterns Zinc finger C2H2 type domain signature. 162 182 IPR013087 -
Bach2g00140 365 FunFam Zinc finger 45-like 157 183 - -
Bach2g00140 365 Gene3D Classic Zinc Finger 160 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00140 Bach-Chr2 1771009 1772198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00140 133 310 C2H2 Transcription Factor Family AT1G34370 60.870 1.60e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach2g00140 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00140 - - qsa:O6P43_023190 426.787