Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00139 ATGGGAAGGTCTCCATGCTGTGATGAAAGTGGTCTGAAGAAAGGCCCTTGGACCCCTGAAGAAGATCAGAAGCTTGTTAGCCACATTCAGAAACATGGTCATGGCAGCTGGAGGGCTCTCCCTAAATTGGCAGGGCTCAATAGATGTGGAAAAAGTTGCAGGTTAAGATGGACCAATTACTTAAGACCTGACATCAAGAGAGGCAAATTCTCCCAAGAAGAAGAACAGACAATTCTCAATCTCCATGCTATCCTGGGCAACAAGTGGTCAGCCATTGCCACCCACCTACCAGGTCGTACAGATAATGAAATCAAGAATTTCTGGAACACTCATCTGAAGAAGAAGCTGATTCAAATGGGTTATGATCCAATGACCCATCAGCCTAGAACAGATATATTCTCAAGCTTACCTCAACTTCTTGCTCTGGCAAATCTCAAAGAACTACTTCTGGATCATCATCAATCATGGGATCAACAAAATGCTGCAGCTGCTAGACTACAAGCAGAAGCCGTTCAACTGGCCAGGCTTCAATGCCTTCAACATCTTCTACAACTTCATCCTGCCATTGAAGCTAATAATATCAACAGCATAAATAGTTCCTTCACTGACATGGATACCATTAATCTTCAGAACTCTCTCTCCGTGATGAAGAACAATTCAGTTCAAAGTTATTCAGCTCAGTTGGATCAAAACACCATTAATCCAGCTTCTGGAGTTGAAGCCTACAGTGCCCAATTTGGGAATGACCATAATATCCCTTTCTCTCACATGCCTGAACTGAAAACGCCTTGTAGCTATCAACCACCACCAAGTAAAAAAGATACAGTTCAAGCCCTTGAAAATTCTCCCAACTCTCCATGGTTTCTATCATGTTCAAGCACTCCATCTCCTTCCCCGGTGGCTCCACCACCTATGGCGGAGACTTTGATGACCAATATGACTGATAATTGCAGTGCTTCTAGTTTTGGTGAAGTGGGTGCTTCTATTTGGCCTGAGCTGCTCCTCGATGACGCTTTATTACATGAGATTGTCTAGTTTTGTCCCACAACTGCATGATTCACCCACTTTCATGTGTATTCTTGTTATGTTGCTTATATA 1098 0.4317 MGRSPCCDESGLKKGPWTPEEDQKLVSHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILNLHAILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDIFSSLPQLLALANLKELLLDHHQSWDQQNAAAARLQAEAVQLARLQCLQHLLQLHPAIEANNINSINSSFTDMDTINLQNSLSVMKNNSVQSYSAQLDQNTINPASGVEAYSAQFGNDHNIPFSHMPELKTPCSYQPPPSKKDTVQALENSPNSPWFLSCSSTPSPSPVAPPPMAETLMTNMTDNCSASSFGEVGASIWPELLLDDALLHEIV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00139 344 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach2g00139 344 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach2g00139 344 CDD SANT 69 112 IPR001005 -
Bach2g00139 344 SMART sant 66 114 IPR001005 -
Bach2g00139 344 SMART sant 13 63 IPR001005 -
Bach2g00139 344 Gene3D - 13 66 - -
Bach2g00139 344 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach2g00139 344 CDD SANT 16 61 IPR001005 -
Bach2g00139 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach2g00139 344 FunFam Transcription factor MYB39 69 130 - -
Bach2g00139 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 227 - -
Bach2g00139 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach2g00139 344 FunFam MYB-related transcription factor 13 66 - -
Bach2g00139 344 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach2g00139 344 Gene3D - 69 116 - -
Bach2g00139 344 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00139 Bach-Chr2 1753617 1754964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00139 1 343 MYB Transcription Factor Family AT5G10280 51.117 6.63e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach2g00139 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00139 K09422 - csin:114260594 407.912