Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00084 ATGACAGGGAAGAGAAACCAAACAAGCCCCGTTGGAAGCCCAGACAGTGGTTCGAAAGAACAAGACCGGTTCCTTCCAATAGCCAACGTTAGCCGTATCATGAAAAAGGCACTCCCAGCCAATGCCAAAATCTCCAAGGAAGCCAAGGAAACTGTCCAAGAATGTGTCTCTGAGTTCATAAGCTTCATCACCGGCGAAGCCTCCGACAAGTGCCAGAGAGAGAAGAGGAAGACCATCAACGGCGATGACCTTCTTTGGGCTATGACAACGTTAGGGTTCGAGAACTACGTTGGACCTTTGAAGGTTTACCTCAACAACTACAGAGAAACAGAGGGAGAAAAGGGTAATTCCATGGCTAGACCAGAAGATCACTGTCCCACGGAATTAGCCAATGATGAGATCGTTGAAATTAATAATTCTGTGCCAAACAAGGCATATTTAGTACCCAATTTCGATGGTGGTTTCTGCTCTGTTGGCGTTGGGTCACAGCTAAATCCCAAAAGCTTCACGGAGATCGGAGGGATCACTGGTTACAGAGAGAACTCCGTCAACGGTGATGATGCAAACGGGAATAAGGTGGCGGCGACCAATCTACGTTACAGGGTTGAATGGTAG 615 0.4764 MTGKRNQTSPVGSPDSGSKEQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYRETEGEKGNSMARPEDHCPTELANDEIVEINNSVPNKAYLVPNFDGGFCSVGVGSQLNPKSFTEIGGITGYRENSVNGDDANGNKVAATNLRYRVEW 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00084 204 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Bach2g00084 204 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Bach2g00084 204 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Bach2g00084 204 Gene3D Histone, subunit A 13 138 IPR009072 GO:0046982
Bach2g00084 204 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
Bach2g00084 204 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 138 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach2g00084 204 FunFam Nuclear transcription factor Y subunit B-3 13 136 - -
Bach2g00084 204 MobiDBLite consensus disorder prediction 1 16 - -
Bach2g00084 204 ProSitePatterns NF-YB/HAP3 subunit signature. 55 71 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach2g00084 204 MobiDBLite consensus disorder prediction 1 23 - -
Bach2g00084 204 SUPERFAMILY Histone-fold 21 124 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00084 Bach-Chr2 1046319 1046933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00084 12 123 CCAAT-HAP3 Transcription Factor Family AT4G14540 81.739 1.21e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach2g00084 CBFD_NFYB_HMF 3.6e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00084 K08065 - gmx:100810059 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g00084 2 1046319 1046933 Bach2g00084 2 1046319 1046933 ECH