Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00037 ATGTATGCCTCTAGTTCTACTCCCTTTGCTGCACAGCTCTTCCACGATCGTCTTGGGGACCTGCACTCAAGAAGATTACTGTTTCGTAACCCACTTAACCAATCACCCAACTCAGCCAATCCCCCTGCTTCCACAAACAGCCACAACTTCACAGGTTCATATATAGGTGATGGCAATTTTGATGCAAATGTTGTTATGGTACTCTCAGTCCTACTCTGCGCTCTAATTTGCTCACTGGGGTTGAACTCCATTATAAGGTGCGCATTAAGGTGTTCGAATTTTGTGACAAATGACTCTGGGAGTAATCCTCCTGCTCGATTGGCCAACACAGGAATCAAGAAAAAGGCTCTTAAGGCCTTCACCACAGTAAGCTACTCCCCTGAGTTGAAACTGCCAAGCTTGGACACAGAGTGTGTCATATGCCTATCAGACTTTACAAAAGGTGATCGGGTGCGGATTTTGCCCAAGTGCAACCATGGCTTCCATGTCCGCTGCATTGACAAATGGCTAAGTTCACACTCCTCTTGCCCTACATGCAGACAGTGCCTAATTAAGACCTGCCAAAAGATTGTTGGCTGCAGCCAGCCTACCTCAACTCAACCACCTGCACTGCCAGTATCAGTGCCAGAAACCATTGTAAGGATTGCGCCACTAGAACCTGAAGCTCTGGTCCGCAATTACAGGGAAGTTAGCTAA 696 0.4727 MYASSSTPFAAQLFHDRLGDLHSRRLLFRNPLNQSPNSANPPASTNSHNFTGSYIGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVTNDSGSNPPARLANTGIKKKALKAFTTVSYSPELKLPSLDTECVICLSDFTKGDRVRILPKCNHGFHVRCIDKWLSSHSSCPTCRQCLIKTCQKIVGCSQPTSTQPPALPVSVPETIVRIAPLEPEALVRNYREVS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00037 231 SMART ring_2 138 179 IPR001841 -
Bach2g00037 231 PANTHER RING-H2 FINGER PROTEIN ATL78 17 223 IPR044602 GO:0016567|GO:0016740
Bach2g00037 231 FunFam RING-H2 finger protein ATL73 98 185 - -
Bach2g00037 231 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Bach2g00037 231 SUPERFAMILY RING/U-box 116 185 - -
Bach2g00037 231 CDD RING-H2_EL5-like 137 180 - -
Bach2g00037 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 185 IPR013083 -
Bach2g00037 231 Pfam Ring finger domain 137 180 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00037 Bach-Chr2 501230 501925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00037 38 184 C3H Transcription Factor Family AT3G10910 51.613 2.58e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00037 K19040 - qsa:O6P43_023336 348.591