Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00033 ATGGGAAGAGACGATCTGTACATCACAGTTCCAAGTTTCTTTAGGTGTCCCATATCGCTTGACGTCATGAAGTCTCCCGTCAGTCTTTGCACAGGAGTCACCTACGACCGTTCCAGCATCCAACGCTGGCTGGACAACGGCCACAACACCTGCCCCGCTACCATGCAGGTACTCCAGACCAAGGAATTCGTTCCCAACCGTACTCTACAGAGACTTATTCAGATCTGGACGGACTCGGTCCGCCAACGAGTCGAATCGGTCGAGTCCCCGCCTTCTAAATCTGTCCCTTCCCTAGACCAAGTCCTATACGCTATCAGAGATATGCAAACTCAAAGCCAGAGCCAGAACCGATTGGATTCGTTGACAAAAATTGTATGTTTCGCCCGAGAATCCAAGGAGAAGAGAGAATTTCTTGCTAACATTGACAGTCTTGTTCCTATGCTGGTTGGTTTCCTGGACAATGTCGATGATGCTGTTAGTGAGAGCGTTGAATTTCTCGAAAAAGTTGTTGAGGCTTTGGATTTGGTTTTAGATAAAAGCCAAGAGCAGCGCGAGCAATTGACAAAGCTGACGTTGAAGAAGCAGAGCAATTGCTTAGCTTCTCTGGTTCTTGTTCTACAACAAGGCAGCAGCTTGGAATCTAGAATTGGATCGGCTAGGATATTGGAAGCCTTGGCCATGGATGCTGAGTCGAAGGTGTTGATTGCTGAAAAGGAGGGGGCAATACCGGAATTGCTCAAATTGATCACATTGACACCAGAGAAAGACGGAGATGTAATCGAGAGTGGGTTGTCGTGTTTGGTGGCAATCTCGATGCCAAAACGGAACAAGATGAAATTGGTCAAATTTGGAGGTATACGGATACTGTCTCAATTGGTTTCTGAGACGAACCTGAGCGTTGGGTTAACGGAAAAAGTGCTGAAACTGCTAGAAACGGTGTCGTCAAGCAAGGAAGGGCGGGCGGAGATCTGCGAGGACGAAAGGTGCGTGGCGGGGATATTGCACAAGGTTCTAAAAGTGTCCAGTGTGGCATCGGAGCATGCCGTGACGATACTATGGAGTATTTGCTATCTATTTCGTGACCAAAAAGCGCAGGAAGCGGTGACGAAAGCCAATGGTTTAACCAAGATTCTGCTCCTTATGCAGAGCAATTGTTCAGCAGCTGTTCGACAAATGTCCGCTGATTTGCTTAAGATTTTTCGTGTCAACTCAAAATCATGCCTTCCTTACTATGATACCAACACTACGCATATCATGCCTTTCTGA 1266 0.4716 MGRDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGHNTCPATMQVLQTKEFVPNRTLQRLIQIWTDSVRQRVESVESPPSKSVPSLDQVLYAIRDMQTQSQSQNRLDSLTKIVCFARESKEKREFLANIDSLVPMLVGFLDNVDDAVSESVEFLEKVVEALDLVLDKSQEQREQLTKLTLKKQSNCLASLVLVLQQGSSLESRIGSARILEALAMDAESKVLIAEKEGAIPELLKLITLTPEKDGDVIESGLSCLVAISMPKRNKMKLVKFGGIRILSQLVSETNLSVGLTEKVLKLLETVSSSKEGRAEICEDERCVAGILHKVLKVSSVASEHAVTILWSICYLFRDQKAQEAVTKANGLTKILLLMQSNCSAAVRQMSADLLKIFRVNSKSCLPYYDTNTTHIMPF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00033 421 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
Bach2g00033 421 Coils Coil 163 190 - -
Bach2g00033 421 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 89 IPR013083 -
Bach2g00033 421 SMART Ubox_2 13 76 IPR003613 GO:0004842|GO:0016567
Bach2g00033 421 Gene3D - 139 300 IPR011989 -
Bach2g00033 421 Gene3D - 301 401 IPR011989 -
Bach2g00033 421 FunFam RING-type E3 ubiquitin transferase 2 82 - -
Bach2g00033 421 PANTHER WDSAM1 PROTEIN 9 409 IPR045185 GO:0061630
Bach2g00033 421 Pfam U-box domain 10 79 IPR003613 GO:0004842|GO:0016567
Bach2g00033 421 SUPERFAMILY ARM repeat 196 412 IPR016024 -
Bach2g00033 421 CDD RING-Ubox_PUB 11 63 IPR045210 -
Bach2g00033 421 SUPERFAMILY RING/U-box 4 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00033 Bach-Chr2 441305 442570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00033 1 421 U-box Gene Family AT5G64660 52.570 1.28e-142 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00033 - - qsa:O6P43_023349 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g00033 2 441305 442570 Bach2g00033 2 441305 442570 ECH