Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00029 ATGGCTCCTGCTACCTCAGCGGCGGCGGCTCAGAGGCTCATCGGCTTCAGTCGCCGCACACAAGCACCGCGTCACTCATCACCGCCGGTCTCTCGGCCACAGAAGAAGTATAAGTCTCTGACCGAGATAATGGCGAAAGCCCGCTTTGCTGTCATTGAGCGAGAGGATTACAGCGACGTAGTTTGTGAGCAATGCGGGTCCGGTGGAAAACAAGACGAGCTGCTCCTATGTGACAAATGCGATAAAGGCTTCCATATGAAATGCCTGAGACCCATTGTGGTCAGAATCCCGATTGGATCATGGCTTTGCCCTAAGTGTTCGGGAGAGAGAATAATAAGAAGATTATCCCAGAAGAAGATTATTGATTTTTTCCAGATTCAGAAGTGTACTGATGCCAAACACAATTGCTCAGATCCTCAAGATGTCAAGAAGCGTCGGAGACGGTCAGGATCGCTGTTATTGCAAAAGAAAAGGAGGAGATTATTGCCATTTATTCCAACAGAAGATGCTGTCCAGGGACTGAAACAGTTGCGTTCTCTTGCTTCTGCTTTAACAACATTGCATATGGAATTCAGTGATGATCTCACATATTCACCTACAATGGCTCCTAGAGCTGCTAATCAAGCAGAGTTTGAAAATGGTGGCATGCAGGTTCTTTCCAGGGAAGATAACGAAACATTGGAATACTGCAAAGCCATGTGTAGAAGAGGCGAATGCCCTCCCCTTTTAGTTGTCTTTGATTCATGTGAAGGCTATACTGTAGAGGCAGATGGCCCAATAAAGGATATGACATTTCTTGCCGAGTATGTTGGCGATGTGGATTACCTTAAGAACCGAGAGCACGATGATTGTGACAGTATGATGACCCTTCTTCTTGCTACAGATCCTTCCAAAAGTCTTGTCATCTGCCCTGATAAACGTGGAAACGTTGCTCGCTTTATCAATGGCATCAACAATCATACTCAGGAAGGGAGGAAGAAGCAGAACTGTAAATGCGTGAGATACAGTGTTGATGGTGAATGCAGGGTCTTTTTGGTTGCTACTCGTGATATTTCCAAGGGAGAGAGACTGTATTATGATTACAACGGATATGAGCATGAATACCCCACTCATCATTTTATCTAA 1125 0.4542 MAPATSAAAAQRLIGFSRRTQAPRHSSPPVSRPQKKYKSLTEIMAKARFAVIEREDYSDVVCEQCGSGGKQDELLLCDKCDKGFHMKCLRPIVVRIPIGSWLCPKCSGERIIRRLSQKKIIDFFQIQKCTDAKHNCSDPQDVKKRRRRSGSLLLQKKRRRLLPFIPTEDAVQGLKQLRSLASALTTLHMEFSDDLTYSPTMAPRAANQAEFENGGMQVLSREDNETLEYCKAMCRRGECPPLLVVFDSCEGYTVEADGPIKDMTFLAEYVGDVDYLKNREHDDCDSMMTLLLATDPSKSLVICPDKRGNVARFINGINNHTQEGRKKQNCKCVRYSVDGECRVFLVATRDISKGERLYYDYNGYEHEYPTHHFI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00029 374 ProSiteProfiles SET domain profile. 240 362 IPR001214 GO:0005515
Bach2g00029 374 Pfam PHD-finger 61 107 IPR019787 -
Bach2g00029 374 ProSitePatterns Zinc finger PHD-type signature. 62 106 IPR019786 -
Bach2g00029 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 121 IPR013083 -
Bach2g00029 374 SMART PHD_3 61 107 IPR001965 -
Bach2g00029 374 CDD SET_ATXR5_6-like 237 374 - -
Bach2g00029 374 FunFam Histone-lysine N-methyltransferase ATXR5 146 374 - -
Bach2g00029 374 Pfam SET domain 217 362 IPR001214 GO:0005515
Bach2g00029 374 SMART set_7 240 368 IPR001214 GO:0005515
Bach2g00029 374 SUPERFAMILY FYVE/PHD zinc finger 27 107 IPR011011 -
Bach2g00029 374 SUPERFAMILY SET domain 230 362 IPR046341 -
Bach2g00029 374 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 135 372 - -
Bach2g00029 374 ProSiteProfiles Zinc finger PHD-type profile. 59 109 IPR019787 -
Bach2g00029 374 Gene3D SET domain 145 374 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00029 Bach-Chr2 403961 407859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00029 57 120 C2H2 Transcription Factor Family AT3G01460 40.625 2.75e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach2g00029 SET 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00029 K24406 - qsa:O6P43_023354 612.838