Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00028 ATGACGATGCATTTCAGAAAACCCTTCAAATCCAATTCTCTATTTCGATCCCCTCTCTCATTATCAATGGCTTCTATCCTCTGCGTTTCCATTCTTTCCATCTTTCTTTTCCTCTCTATCTCCTCTGCCACCCGCCACCATCAGCCCTCGCCACCACGTTCCCCCAAGCCTTCTCTTACCACGACTGTCACACCCGAGATCCAACAAGCCTGCAAAGCCACCCGCTTCCCTGAACAGTGTCAGACCTCTCTGGCTCAATCCAACCACGTCCCTTCCAACCCGACCACACTTCAACTCGTCCAAGCGGCCATGGGGGTCTCCTCCGATAACCTCAAGACCGCTCAGTCAATGGTCAAGGCCATTCTAGATGCCTCGGCAAGCAGCCAGAATCGTACCGTTGCTGCAAAGAGCTGTCTCGAAGTGCTCCATAACTCGGAGTACCGCATTTCTCTCAGCAATGACGCGCTGTCACGCGGCAGGAACAAGGATGCCCGGGCTTGGATGAGCGCCGCCTTAGTGTACCAGTACGACTGCTGGTCCGGGTTGAAGTACGCCAACGACACCCGAATGGTGGGTGAAACCATGGCCTTCTTGGACTCTCTCACCGCTCTTTCCAGTAACGCCCTCAGCATCATCATGTCCTACGATCGATTCGGGAAGGACACTGCATCCTGGACACCGCCCATGACCGAGCGCGGTGGGTTCTGGGAGGGATCCGGGTCGGGATCCGGTTCTGGATTGGGCTTCAGTGGTGGGTTCCCAGCCAAGTTGACGGCGGACGCGACGGTGTGTAAGGACGGGGGAAAGGGCTGTTACAAGACGGTGCAGGAAGCTGTCAACGCCGCGCCCGACAACGCAGGGCCGCGGAGGTTTGTGATACACATACAGGAAGGGGTTTATGAGGAAACGGTTCGGGTTCCGTTGGAGAAGAAAAATGTGGTCTTTTTGGGCGATGGCATGGGTAAGACGGTCATCACAGGCTCCGCCAATGTGGGCCAGCCAGGAATGACTACCTACAATTCAGCTACAGTTGCGGTTCTTGGGGATGGGTTCATGGCCAAGGATTTGACAATACAGAACACAGCAGGTCCTGATGCTCACCAAGCAGTGGCCTTCAGATCAGACAGTGATTTGTCTTTCTTTGAGAACTGTGAATTCATAGGCAATCAAGATACTCTTTATGCTCATTCACTCCGGCAGTTCTATAAATCATGTCGCATCCTGGGCAATGTGGATTTCATCTTTGGCAACTCAGCTTCTATTTTCCAAGACTGCCAGATTTTAGTGCGTCCCAGGCAAGTGAAGCCTGAAAAGGGGGAGAACAATGCCATCACAGCGCATGGCAGGACAGACCCTGCCCAGACAACAGGCTTTGTTTTCCAGAACTGTTTGATTAATGGCACTGAGGAATACATGAAATTGTATTACAGCAAGCCTAAAGTACACAAGAACTTCTTGGGAAGGCCCTGGAAGGAGTATTCAAGAACTGTTTTCATTCACTCTTTATTGGAAACTCTCATCACACCACAAGGTTGGATGCCATGGACTGGTGACTTTGCGCTAAAGACACTATTCTATGGCGAATTTGAGAATTCAGGACCTGGTTCTGATACGAGTCAGAGAGTACCCTGGAGTAGCAAGATCCCAGCTCAGCATGTGTTCACATATTCAGTCCAGAATTTCATTCAAGGAGATGAATGGATTCCCTCATCTCAGTTATTAGCTCATCGTCGTAAAGTTGATAATATATTGACAAGGAGGCATCATTAA 1770 0.5079 MTMHFRKPFKSNSLFRSPLSLSMASILCVSILSIFLFLSISSATRHHQPSPPRSPKPSLTTTVTPEIQQACKATRFPEQCQTSLAQSNHVPSNPTTLQLVQAAMGVSSDNLKTAQSMVKAILDASASSQNRTVAAKSCLEVLHNSEYRISLSNDALSRGRNKDARAWMSAALVYQYDCWSGLKYANDTRMVGETMAFLDSLTALSSNALSIIMSYDRFGKDTASWTPPMTERGGFWEGSGSGSGSGLGFSGGFPAKLTADATVCKDGGKGCYKTVQEAVNAAPDNAGPRRFVIHIQEGVYEETVRVPLEKKNVVFLGDGMGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKDLTIQNTAGPDAHQAVAFRSDSDLSFFENCEFIGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPEKGENNAITAHGRTDPAQTTGFVFQNCLINGTEEYMKLYYSKPKVHKNFLGRPWKEYSRTVFIHSLLETLITPQGWMPWTGDFALKTLFYGEFENSGPGSDTSQRVPWSSKIPAQHVFTYSVQNFIQGDEWIPSSQLLAHRRKVDNILTRRHH 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00028 589 SUPERFAMILY Pectin lyase-like 259 570 IPR011050 -
Bach2g00028 589 SMART PMEI_2 62 211 IPR006501 GO:0004857
Bach2g00028 589 Pfam Pectinesterase 260 565 IPR000070 GO:0030599|GO:0042545
Bach2g00028 589 CDD PMEI-like_3 70 217 - -
Bach2g00028 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 212 IPR035513 -
Bach2g00028 589 FunFam Pectinesterase 254 578 - -
Bach2g00028 589 PANTHER PECTINESTERASE 34 569 - -
Bach2g00028 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 214 IPR035513 -
Bach2g00028 589 Pfam Plant invertase/pectin methylesterase inhibitor 67 211 IPR006501 GO:0004857
Bach2g00028 589 NCBIfam pectinesterase inhibitor domain 34 212 IPR006501 GO:0004857
Bach2g00028 589 Gene3D - 254 577 IPR012334 -
Bach2g00028 589 FunFam Probable pectinesterase/pectinesterase inhibitor 51 65 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00028 Bach-Chr2 385578 387768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00028 52 567 Carbohydrate Esterase AT5G09760 66.988 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00028 - - qsa:O6P43_023358 894.034