Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00027 ATGGGTGGCAATCAGAATACTGTAACTTTCTCAAATTTTAACAGCACTAGTTGTAATCTTGAGAAAATGGAAGGGAATACTGGTAATATTGTTCTTGAACAAATCCCTATGGGTTCTGTTTGGGGGCCAAACTACCCTTTTCAAATGCAGCAAATACCATTCTCATCGTCATCCTCATCCAGTCTATTGCCTACCTCTTGTTCGGGTTTCCTTAATGATATGCTAGGGATCCACTCAAAAGAAGAAGAAGAATTAGAAGAGGAACCAGAAGAAGACCTAGGAACCATGAAGGAGATGATATACAAGATAGCTGCTATGCAGCCAGTGGAGATCGACCCAGCCACTATTCGAAAGCCAAAGAGGCGAAACGTTAGAATTAGCGATCACCCACAAAGCGTGGCTGCACGTCACAGGCGAGAGAAGATCAGTGAGAAAATCCGTATCCTCCAAAGACTTGTCCCTGGAGGAACTAAAATGGATACTGCTTCTATGCTCGACGAAGCCATTCGCTATGTCAAGTTCTTGAAGAGACAAATCAGGTTGCTGCAATCCTCACCCCATTCTCTACATTCACACCCACAATGCATTCCTGCTTTGGGCCTTATTACCAACACTGCTACAACTGCCACTAATGCTGCAAATTCTGGCTCAGCCCCCACTGCCTCTCATCATTGGCCTTTTGCAATGCTACAGTACACTTCCACCACCACCTCCTCCTCCTGCTCCTCCGACACAACCGCTGCTGCGGCAGCACTAGGATTCAACGCCAAAGGGGAAGGAGGCCCAGCTCATCATGCTACCCATGCCTCTTCCTTTAATCATGATCAGGTAATTAGTGACTGA 843 0.4626 MGGNQNTVTFSNFNSTSCNLEKMEGNTGNIVLEQIPMGSVWGPNYPFQMQQIPFSSSSSSSLLPTSCSGFLNDMLGIHSKEEEELEEEPEEDLGTMKEMIYKIAAMQPVEIDPATIRKPKRRNVRISDHPQSVAARHRREKISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSPHSLHSHPQCIPALGLITNTATTATNAANSGSAPTASHHWPFAMLQYTSTTTSSSCSSDTTAAAAALGFNAKGEGGPAHHATHASSFNHDQVISD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00027 280 SMART finulus 132 181 IPR011598 GO:0046983
Bach2g00027 280 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 44 231 IPR045843 GO:0003700|GO:0006355
Bach2g00027 280 Gene3D - 125 195 IPR036638 GO:0046983
Bach2g00027 280 Pfam Helix-loop-helix DNA-binding domain 136 175 IPR011598 GO:0046983
Bach2g00027 280 FunFam BHLH transcription factor 129 193 - -
Bach2g00027 280 MobiDBLite consensus disorder prediction 259 280 - -
Bach2g00027 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 194 IPR036638 GO:0046983
Bach2g00027 280 CDD bHLH_AtIND_like 127 184 - -
Bach2g00027 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00027 Bach-Chr2 376710 377552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00027 96 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 78.495 5.81e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach2g00027 HLH 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00027 - - gmx:100775296 237.654