LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g00017	TCGATCTCTCTCTGCTATTCTTCCTAAATTCTCCTCTTTTCTTTCACCCAGTCCAATTTGGATTCTAGAATGCCCGCTTGGTGGGGAAGAAAATCCTGCAAGAACAAGGAGCAGCAGCAGGAACCACATGGCGGCGCTTCATTTAATTTCATCAAATCCCCGATTAGAAATGCTAAAACAAGTTCCAAAAAAGGAAAGGACAAAGCCAAGAGCTTCGATGAGGTCTCCGGCGTGATCCTCTCTCGGAATTCCCCGAGGACCAGCAAGGATTTTACTGCTGTTGTTGGCTCTTCGTCTTATTGTGATTCCGATGGTGCTGATAAGAAAGGGCTTCCCTTGCCTCGACCATCCGTCTCACCAAACCATAGCTTTAGGACCGATCAAGCTCTTGTCTTGGGATCTTCCTCTATGTCTACTTCAAGCATCAGCTCTTCTGGCTCTTATGATGATAATCCAATATCTCAATTTAATGCCGCCAGAGGACAAGGTGACAAAAAAATCAACACGAGGTCAAAAAGCCCAGGTCCTGGTTCAAGAGGCCCCACCAGTCCTACATCACCTCTGCATCCCAGGTTGCATGCTATGAGTCTTGACTCTCCTACAGGCAAGCAAAATGATGGAAGGAGTGAATGTCATCCGTTGCCTCTTCCTCCAGGTTCTCCAACGAGTCCTTCTGCTCTTTCTAACAGCCGAGCAACCAGATTTCTAGAAAACACTTCCTCTAATCTTTCAAAGTGGAAGAAAGGAAAGCTTCTAGGTCGTGGAACCTTTGGGCATGTTTACCTGGGATTTAACAGTGAAAGTGGACAAATGTGTGCAATTAAAGAAGTCAAGGTTGTTTCTGATGATCAAACGTCCAAAGAGTGTCTCAAGCAACTTAACCAGGAGATAAATTTGCTTAATCAGCTTTCACATCAAAACATTGTTCAATACTATGGAAGTGAACTGGGAGAAGAAACACTATCAGTTTATTTGGAATATGTCTCAGGTGGTTCTATTCACAAGTTACTTCAGGAATATGGTTCATTTACGGAACCTGTTATTCAAAACTATACCAGGCAGATTGTCTCTGGACTTGCCTATTTACATGAAAGAAACACAGTGCACAGGGATATCAAAGGGGCCAACATACTAGTTGATCCCAATGGTGAAATCAAATTGGCAGACTTTGGAATGGCCAAACATATAAACTCTTCTACCTCTATGCTTTCTTTCAAGGGAAGTCCATATTGGATGGCACCTGAGGTTGTAATGAACACAAATGGCTATAGTCTTCCGGTGGATATATGGAGCTTGGGATGTACAATTCTTGAAATGGCAACATCAAGGCCTCCGTGGAGTCAGTATGAAGGGGTGGCTGCAATATTTAAAATTGGGAACAGCAGAGATATGCCATATATTCCTGAACATCTTTCCAGCAATGCAAAGAGTTTCATAAAGCAATGCTTACAGAGAGACCCATCAGCTCGCCCAACGGCGTCAGAGTTACTTGATTATCCCTTTATCCGAGATCATTCAGCAACGAGAGCTACAAATGGAAACATAACCAGGGATGCTTTCCCCTATATGTTAGAAGGAAGCCGGACACCGCCGGTACTAGAGCTTCATTCCAATAGAACAAGCATAACTTCACTTGACGGAGACTATGGGATAAAGTCAACTATTGCAACTTCACGAGCATTAAGGAGTCCAAGAGAGAACACACGAATGATCACATCCTTACCAGTATCTCCCTGTTCAAGTCCATTGCGACAGTACGGACCGGCACACAAGAGTTGTTTCCTTTCTCCTCCTCACCCAACTTATACCATGATGGGACAAAATTCCTACACTTTGAATGACCTCTCATCATATCCAGTGAGATCCAATGCTACTACATTCACCCTTGATCCTTGGCATGAAACTTATTCATACAAAGCCCATACACCTGGCGGATCCCCTAGAAACAGACTCATATGAGCTGTGAGTGTAAATACCTATAGAACTGCAAATCTTTCTTGGTTTCCCTCTGCATGCCATTTGTGGACTGGAATGCTATTGAACTTGAATCTGAATCTCAAGTACAGACTCTCTTATGTAAAAGATTTTGGTCCATTTTTGCTACACGAGAAACTAACTAGATGAAGGGACAAGTGAGCGAGAACAGCTCTGTGCTTTCGCCTTTCAGTGGATGGGGAGACCTTGTTGCTTGTAACAAATTTATTGATTATTGTAAATGCCAGGGGTTGTGTCTCTCTGTAGTAACGTTTATGTTGTATTATTGTAAGTTCATGGCAGAAGTAAACAACAAAAAAAATTAAAAAGGGAAGAGTATATATA	2319	0.4269	MPAWWGRKSCKNKEQQQEPHGGASFNFIKSPIRNAKTSSKKGKDKAKSFDEVSGVILSRNSPRTSKDFTAVVGSSSYCDSDGADKKGLPLPRPSVSPNHSFRTDQALVLGSSSMSTSSISSSGSYDDNPISQFNAARGQGDKKINTRSKSPGPGSRGPTSPTSPLHPRLHAMSLDSPTGKQNDGRSECHPLPLPPGSPTSPSALSNSRATRFLENTSSNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVKVVSDDQTSKECLKQLNQEINLLNQLSHQNIVQYYGSELGEETLSVYLEYVSGGSIHKLLQEYGSFTEPVIQNYTRQIVSGLAYLHERNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSRPPWSQYEGVAAIFKIGNSRDMPYIPEHLSSNAKSFIKQCLQRDPSARPTASELLDYPFIRDHSATRATNGNITRDAFPYMLEGSRTPPVLELHSNRTSITSLDGDYGIKSTIATSRALRSPRENTRMITSLPVSPCSSPLRQYGPAHKSCFLSPPHPTYTMMGQNSYTLNDLSSYPVRSNATTFTLDPWHETYSYKAHTPGGSPRNRLI	629

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bach2g00017	629	MobiDBLite	consensus disorder prediction	1	206	-	-
Bach2g00017	629	CDD	STKc_MEKK1_plant	222	479	-	-
Bach2g00017	629	FunFam	Mitogen-activated protein kinase kinase kinase	221	503	-	-
Bach2g00017	629	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	66	487	-	-
Bach2g00017	629	Gene3D	Transferase(Phosphotransferase) domain 1	220	498	-	-
Bach2g00017	629	MobiDBLite	consensus disorder prediction	96	162	-	-
Bach2g00017	629	SUPERFAMILY	Protein kinase-like (PK-like)	220	480	IPR011009	-
Bach2g00017	629	ProSitePatterns	Protein kinases ATP-binding region signature.	229	252	IPR017441	GO:0005524
Bach2g00017	629	Pfam	Protein kinase domain	224	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Bach2g00017	629	ProSiteProfiles	Protein kinase domain profile.	223	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g00017	Bach-Chr2	280964	286665	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g00017	1	542	MAP Kinase Kinase Kinase	AT1G53570	59.034	0.0	564

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Bach2g00017		Pkinase	4.9e-75	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g00017	K04421		-	qsa:O6P43_030333	899.427

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