Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00013 ATGAAGGAAGCTCAAATGACGATTCCCCACTTGTTCAGATGCCCTATCAGTCTAGATTTGTTCCAAGATCCAGTCACTTTATGCACAGGCCAAACTTATGATAGGTCAAGCATAGAAAAGTGGTTGGCTGCTGGTAATCTCACATGTCCTGTTACAATGCAGAGGCTTGATGATCCATCCATTGTTCCCAATCACACTCTACGTCATTTGATCGATCAGTGGCTTCAAATGGGTTCCCAATTCGATCCTGGTAATTCTGCAGCAATTGATTGTTTAGCAGCAGTGAAACAAAGCCTTGAATCAGAGGAGACCACCTTAGAGAACAAGCTCCAAGCACTTGAGAAAATCAGAGTCTTATCTGATGAATATTGTTCTTTCAAGAAATCATGTTTCTTCCAATTGGGTTTGTTGCCTTTACTTTTGGAGCTTGTTTTTGGAAGATTAGAGCCTTTTCAACTCAGCAAACATGATATGCAGCAGTTTATAGAGGTAGCACTTTGTTGCATTCTAAAATTACTGCATCTTGGCAGCTTGGAGCCTTTAAATATGCTCAAACAAGAATCCAAAATGGCAACATTCCTGCTATTATTTGAACAGGGAACAAGCATAATCAAGACTAGTTTGTGTGATCTTATGGAATTAGCATCAACATCATCGGATCCGGAGACACAGGAGTTATGTTGTATTCTTGGAAACTGTCACAAACTGGTGCACGAGGTTGTTGTCCTTGTTGGCCAAAATTTTAAGGCTGGAATTAAAGGAATATCAGCATTATGCTCTTGGCAATCTAACAGAGAAAATTTAATAAAAGCAGGAGCAATAGATGGAATCATAAAATACATTTCAGGTTGGGAAAGTGAAAGGCGACGTGAGAAGATATTAATGGCTCCATTGGCAATGGCGATATTAGAGAAACTTCTGGTATCAGAGAGTGGAAAAGAGGCACTAGTTAATAACCCAAATGGTATTGAAACTTTGGTAAAGATGGTTTTCAGGGTATCTGATCAAGAGTGCAGTGAGGGTGCTGTTGGGTCACTTGAGATTGTTTGTCGTGATTTTGAGCGTGCCAGAGAGGAAGCCATTGCTGCAGGAATTCTCACTCAGTTACTGTTGCTTCTGCAGAGCCAATGCAGCACCACAACAAAAACAAAGGCAAGAATGCTTCTCAACTTGCTAAGATCCAAGTGGGGTGATGCTCAGCAACCACAACCACAACAACGAAATAAGATCTAG 1233 0.4079 MKEAQMTIPHLFRCPISLDLFQDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQRLDDPSIVPNHTLRHLIDQWLQMGSQFDPGNSAAIDCLAAVKQSLESEETTLENKLQALEKIRVLSDEYCSFKKSCFFQLGLLPLLLELVFGRLEPFQLSKHDMQQFIEVALCCILKLLHLGSLEPLNMLKQESKMATFLLLFEQGTSIIKTSLCDLMELASTSSDPETQELCCILGNCHKLVHEVVVLVGQNFKAGIKGISALCSWQSNRENLIKAGAIDGIIKYISGWESERRREKILMAPLAMAILEKLLVSESGKEALVNNPNGIETLVKMVFRVSDQECSEGAVGSLEIVCRDFERAREEAIAAGILTQLLLLLQSQCSTTTKTKARMLLNLLRSKWGDAQQPQPQQRNKI 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00013 410 CDD RING-Ubox_PUB 9 58 IPR045210 -
Bach2g00013 410 PANTHER WDSAM1 PROTEIN 5 397 IPR045185 GO:0061630
Bach2g00013 410 Pfam U-box domain 8 76 IPR003613 GO:0004842|GO:0016567
Bach2g00013 410 SUPERFAMILY ARM repeat 254 394 IPR016024 -
Bach2g00013 410 FunFam RING-type E3 ubiquitin transferase 8 79 - -
Bach2g00013 410 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 80 IPR013083 -
Bach2g00013 410 Coils Coil 96 116 - -
Bach2g00013 410 SUPERFAMILY RING/U-box 4 76 - -
Bach2g00013 410 Gene3D - 205 403 IPR011989 -
Bach2g00013 410 SMART Ubox_2 11 74 IPR003613 GO:0004842|GO:0016567
Bach2g00013 410 ProSiteProfiles U-box domain profile. 7 81 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00013 Bach-Chr2 238110 239342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00013 8 409 U-box Gene Family AT1G49780 30.969 3.99e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00013 - - gmx:100815247 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g00013 2 238110 239342 Bach2g00013 2 238110 239342 ECH