Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00007 ATGGAAGATGAGGGCCATAGCAATTTGCCAAATGGGGTGAAAACAGAAAGCCCTGAAAGTCCATGCTTAAAGAACAACAGCAATAACAACCACAACAAAGAACAAGATCGCTTCCTTCCTATAGCAAATGTGGGTAGAATCATGAAAAAAGTGCTACCTGGCAATGGGAAAATCTCAAAGGATGCAAAAGAGACCGTTCAAGAATGTGTATCAGAGTTCATCAGCTTTGTTACTGGGGAAGCATCTGACAAATGTCAAAGAGAAAAGAGGAAGACTATCAATGGGGAGGATATCATATGGGCCATCACAACCTTAGGCTTTGAGGACTATGTGGAGCCACTCAAAACCTACCTTCAAAAATATAGAGAGATAGAAGGAGAGAAGCTTAATATTCCAAAGCAACAACGTTCTGAACAAAGGCTACATCAACATCAACAACAACAACATCACCATCAAGATCAAAATAATAATAATATACCCTTAAATACTGTATATTCTTCAACAAATCTCATTTCTCAGCCCCCCTATGTGCCCACGGATCAGTCATTTTCCCTCCCATTCTCCCCAAATTCAATCCAGAAACAGTTACAGCCGCAAGACCAGATCGATTCAGTTGGGCATTGGTAA 627 0.4051 MEDEGHSNLPNGVKTESPESPCLKNNSNNNHNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGEDIIWAITTLGFEDYVEPLKTYLQKYREIEGEKLNIPKQQRSEQRLHQHQQQQHHHQDQNNNNIPLNTVYSSTNLISQPPYVPTDQSFSLPFSPNSIQKQLQPQDQIDSVGHW 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00007 208 MobiDBLite consensus disorder prediction 1 37 - -
Bach2g00007 208 Gene3D Histone, subunit A 25 160 IPR009072 GO:0046982
Bach2g00007 208 FunFam Nuclear transcription factor Y subunit B-3 27 154 - -
Bach2g00007 208 MobiDBLite consensus disorder prediction 180 208 - -
Bach2g00007 208 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 38 102 IPR003958 -
Bach2g00007 208 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Bach2g00007 208 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Bach2g00007 208 PRINTS CCAAT-binding transcription factor subunit A signature 104 122 - -
Bach2g00007 208 MobiDBLite consensus disorder prediction 10 36 - -
Bach2g00007 208 ProSitePatterns NF-YB/HAP3 subunit signature. 69 85 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach2g00007 208 MobiDBLite consensus disorder prediction 134 149 - -
Bach2g00007 208 SUPERFAMILY Histone-fold 35 155 IPR009072 GO:0046982
Bach2g00007 208 MobiDBLite consensus disorder prediction 180 202 - -
Bach2g00007 208 MobiDBLite consensus disorder prediction 134 162 - -
Bach2g00007 208 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 156 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00007 Bach-Chr2 173183 173809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00007 12 208 CCAAT-HAP3 Transcription Factor Family AT2G13570 67.943 2.05e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach2g00007 CBFD_NFYB_HMF 6.9e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00007 K08065 - gmx:100778216 305.834