Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03449 AAACTAATTAGATAAGTTTTTTTTTTTTTTAATAAGAAATAAAAAATTTTACCTTGCGAAGTGGGTATTCGGGGTTGGTGGCGATTGATTCTTATAATGGAGTTGGAGGACAACTTCGATATTGAAGATGTCAACAATGATGGGGAGTCGGTGGATAACGAAGACGACTTCTATAGCGGTGGCGATTACGACGCAGGCTTGTACAGTGACGACGATGACGCGGCAGATTTTGAGTTCATCGACAATGATTCTGATGATTCTGACGACATTGCCTTGTATCGTCATCAGCAAAACTATACCATCTTGAGTGAAAAGGACATTTGTCAACGTCAAGAGGATGACGTTATGAGGATATCTACTGTGCTATCCATTTCAAAAGTTGCTGCTAGTATACTGCTTCACTACTATAATTGGAATGTTGGCAAAGTACATGATGAATGGTTTGTAGATGAAGAAAAGGTTCGTAGTGCTGTTGGCTTATTGGAGAAACCTGTTGTTGAATATCCAAATGCTAAAGAGCTGACTTGTGGAATCTGTTTTGAAACCTATCCTTGTGATAAGATGCATGCCGCTTCTTGTGCCCATCCTTTTTGTACCACATGCTGGGCAGGTTATATTAGCACAGCTATCAATGATGGTCCAGGATGTTTATTGTTGAGATGTCCTGACCCATCGTGTGGTGCTACTGTTGGTCAAGATATGATCAATTTATTGGCTTCTGAAGAAGACAAGGAAAAGTACCGCCGTTATTTTATTAGATCTTATATTGAGGACAACAGAAAGACAAAATGGTGTCCTGCACCGGGCTGTGATTATGCTGTAGACTTTGTCATTGGCAGTGGAAGCTATGATGTTGTGTGCCGCTGCTCATATGGATTTTGCTGGAATTGTACTGAAGAAGCACACAGGCCTGTTGATTGCAGCACTGTGGCTAAATGGATATTCAAGAATAGTGCTGAATCTGAAAATATGAATTGGATACTGGCCAATTCAAAACCTTGTCCAAAGTGCAAGCGGCCAATTGAGAAAAACCAAGGTTGTATGCATATTACATGCACACCACCTTGTAAGTTTGAGTTTTGCTGGCTTTGCCTTGGTGCATGGTCTGAGCATGGTGAGAGAACAGGTGGTTTTTATGCATGTAATCGTTATGAAACAGCAAAACAAGAGGGAGTGTTAGATGAGGCTGAAAAACGAAGAGAGATGGCGAAGAACTCTCTTGAGAGATATACCCACTATTATGAAAGATGGGCGACCAATCAATCAGTATGTGCGACAGTGCAATCCAGGCAAAAAGCTCTTGCAGACTTACAGCAAATGCAGACCGTCCATCTTGAGAAGCTCAGTGACATACAGTGCCAGCCTGAATCGCAGCTAAAATTTATAACAGAGGCCTGGCTACAGATTGTTGAATGCAGGCGTGTTTTAAAATGGACATATGCCTACGGATTTTATTTACCTGAGCATGAGCATGCCAAGAGACAATTTTTCGAGTACTTGCAAGGTGAAGCTGAATCTGGATTGGAACGACTGCATCAGTGTGCCGAGAAGGAATTGCAAGTTTACCTCAACGCGGAGGGTTCATCAAAAAATTTTAATGATTTCCGCACAAAACTTGCTGGACTTACCAGTGTGACACGAAACTACTTTGAGAATTTAGTACGAGCACTGGAGAATGGTTTATCAGATGTGAACTCTCATGGTGCTAGCAGCAGAACAGCAAGCTCAAAGAGCTTAGGAAGTGGGGGCAGTAAGGGTAGAGGTGGGAGGGGGAAGGGTACAGCAGCCAGATCAAGTAGTACCAAAAGCATTGATGATTCTGGCCACTGGTCATGTGATCATTGCACATATGCAAACGCAAGGTCAACGACTATCTGTCAGATGTGCCACCACCGGAGGTAA 1902 0.4248 MELEDNFDIEDVNNDGESVDNEDDFYSGGDYDAGLYSDDDDAADFEFIDNDSDDSDDIALYRHQQNYTILSEKDICQRQEDDVMRISTVLSISKVAASILLHYYNWNVGKVHDEWFVDEEKVRSAVGLLEKPVVEYPNAKELTCGICFETYPCDKMHAASCAHPFCTTCWAGYISTAINDGPGCLLLRCPDPSCGATVGQDMINLLASEEDKEKYRRYFIRSYIEDNRKTKWCPAPGCDYAVDFVIGSGSYDVVCRCSYGFCWNCTEEAHRPVDCSTVAKWIFKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSEHGERTGGFYACNRYETAKQEGVLDEAEKRREMAKNSLERYTHYYERWATNQSVCATVQSRQKALADLQQMQTVHLEKLSDIQCQPESQLKFITEAWLQIVECRRVLKWTYAYGFYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQVYLNAEGSSKNFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVNSHGASSRTASSKSLGSGGSKGRGGRGKGTAARSSSTKSIDDSGHWSCDHCTYANARSTTICQMCHHRR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03449 601 Pfam Ariadne domain 362 530 IPR045840 -
Bach1g03449 601 SUPERFAMILY RING/U-box 139 225 - -
Bach1g03449 601 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 57 447 IPR031127 GO:0004842|GO:0016567
Bach1g03449 601 ProSiteProfiles Zinc finger RING-type profile. 144 188 IPR001841 -
Bach1g03449 601 SUPERFAMILY RING/U-box 294 342 - -
Bach1g03449 601 SUPERFAMILY Ran binding protein zinc finger-like 574 601 IPR036443 -
Bach1g03449 601 CDD RING-HC_ARI6-like 141 202 - -
Bach1g03449 601 Gene3D - 572 601 - -
Bach1g03449 601 MobiDBLite consensus disorder prediction 1 24 - -
Bach1g03449 601 SMART zf_4 576 600 IPR001876 -
Bach1g03449 601 ProSiteProfiles Zinc finger RanBP2 type profile. 574 601 IPR001876 -
Bach1g03449 601 CDD Rcat_RBR_ARI7-like 298 352 - -
Bach1g03449 601 ProSiteProfiles TRIAD supradomain profile. 140 353 IPR044066 -
Bach1g03449 601 SMART ibrneu5 213 275 IPR002867 GO:0008270
Bach1g03449 601 SMART ibrneu5 279 349 IPR002867 GO:0008270
Bach1g03449 601 FunFam RBR-type E3 ubiquitin transferase 276 532 - -
Bach1g03449 601 MobiDBLite consensus disorder prediction 532 550 - -
Bach1g03449 601 SUPERFAMILY RING/U-box 213 282 - -
Bach1g03449 601 Gene3D - 271 532 - -
Bach1g03449 601 MobiDBLite consensus disorder prediction 532 576 - -
Bach1g03449 601 ProSitePatterns Zinc finger RanBP2-type signature. 578 597 IPR001876 -
Bach1g03449 601 CDD BRcat_RBR_ANKIB1 220 284 - -
Bach1g03449 601 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 224 IPR013083 -
Bach1g03449 601 Coils Coil 361 381 - -
Bach1g03449 601 FunFam RBR-type E3 ubiquitin transferase 138 227 - -
Bach1g03449 601 Pfam IBR domain, a half RING-finger domain 291 339 IPR002867 GO:0008270
Bach1g03449 601 Pfam IBR domain, a half RING-finger domain 213 275 IPR002867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03449 Bach-Chr1 42823194 42832931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03449 19 601 ARIADNE family AT1G65430 74.359 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03449 K11968 - cave:132170702 1029.24