Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03425 ATGCATTTTGTGGAAGAGGGAGCAGATGACGACATTCTTGTTCCGCCGCCCAATTTCTCTATGGTTGAGGATGGCATTTTTCGATCGAGCTTCCCTCGACTCTCCAATTTCGACTTCCTTCGAACCCTGAATCTTCGATCCATCATATACTTGTGTCCTGAGCCCTATCCACAAGAAAATTTGGAGTTTCTTCGATCACAAAATATTCAGATCTTTCAATTTGCAATTGAGGGAAAGACGGAGCCTACTCTATCTATTCTCAAGGATACCATGATGGAGGCTCTGAAAGTTCTAATCGATGTGAGAAATCACCCAGTTTTGATCCATTGCAAGCAAGGAAAGCATCGAACAGGTTGCCTTGTTGGTTGCTTGAGAAAGCTGCAGAATTGGTGTTTACCTTCCATATTTGAGGAGTACAACCGATATGCTGGTGCTAAATCCAGGGCAACGGATTTAAGTTTTATAGAAAGCTTTGACGTGTTATGCCTGAGGCAGTGCCTTTACAGCACTATATACCAGTACCAAGGATATGCTTCAAAGAAGAGGCGATTGTTGTGTAGGGAAGAGGAGAATCTACAGAAGCCCCAAGTGACATCAGTTTAG 603 0.4328 MHFVEEGADDDILVPPPNFSMVEDGIFRSSFPRLSNFDFLRTLNLRSIIYLCPEPYPQENLEFLRSQNIQIFQFAIEGKTEPTLSILKDTMMEALKVLIDVRNHPVLIHCKQGKHRTGCLVGCLRKLQNWCLPSIFEEYNRYAGAKSRATDLSFIESFDVLCLRQCLYSTIYQYQGYASKKRRLLCREEENLQKPQVTSV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03425 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 108 118 IPR016130 GO:0016311|GO:0016791
Bach1g03425 200 PRINTS Plant and fungal dual specificity phosphatase signature 13 30 IPR020428 GO:0016791
Bach1g03425 200 PRINTS Plant and fungal dual specificity phosphatase signature 69 83 IPR020428 GO:0016791
Bach1g03425 200 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Bach1g03425 200 PRINTS Plant and fungal dual specificity phosphatase signature 50 63 IPR020428 GO:0016791
Bach1g03425 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 171 - -
Bach1g03425 200 FunFam probable tyrosine-protein phosphatase At1g05000 12 162 - -
Bach1g03425 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 156 IPR029021 -
Bach1g03425 200 Pfam Tyrosine phosphatase family 13 160 IPR004861 -
Bach1g03425 200 CDD PFA-DSP_Siw14 13 159 - -
Bach1g03425 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 167 IPR020422 GO:0006470|GO:0008138
Bach1g03425 200 Gene3D Protein tyrosine phosphatase superfamily 12 161 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03425 Bach-Chr1 42682730 42684756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03425 9 200 Protein tyrosine phosphatase (PTP) family AT3G02800 65.979 2.84e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03425 K18045 - qsa:O6P43_007759 321.242