Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03422 GACCTTTCTAAAATAGAAATATTCTCTCTTTCTTCCTTTTTCGTTGGGTGATCGTCGGAGTCGGAGGGAATGGGAATACCGGCGGGCTTCTCTGGAGTGACTGATTGGTGATATGGAGAACAGAAGCTCATGGAATTCGATGCCGCAATTCCGATTTCCCGAGCGGGCCTCACCGACCCATCCTCCTTGTCACCGTCCCTCACCGCCACCCAAGATGCAATGTGGCAAATGAAATTCAGATCAGGAGAAACAATGGACTCTGGACCTTATCCTGAGCGTCCAGGAGAACTGGATTGTTCATATTACATCAGAACAGGCCTTTGTAGATTTGGAGCAACATGTCGATTTAATCATCCACCTAACAGGAGACTGGCTATTGCTGCTGCAAGGATGAAAGGTGAGTTCCCAGAAAGAATAGGGCAACCAGAATGTCAGTACTATCTGAAGACAGGAACTTGCAAATTTGGGGCCACATGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATCGCTGGAAGAGTTGCCTTAAATATTTTAGGCTATCCACTTCGCCCTGAAGAACCTGAGTGTGCTTATTATTTGAGAACTGGACAATGCAAATATGGGAGCACTTGCAAATTCCATCATCCTCAACCAACTAACATGATGGTTTCATTGCGGGGTTCTCCTGTTTATCCTAGTATCCATTCTCCAACTACACCCGGTCAGCAGTCGTATGCAGGGGGAATTACAAATTGGTCCCGAGCATCTTATATTCCTAGTCCACGTTGGCAAGGTCCTTCAAGTTATGCTTCTCTAATTCTACCCCAGGGAGTGGTTTCAGTGCCTGGATGGAGTGCCTACAGTGGTCAGATGGGATCAATCTCTACACCGGACAGTCCACAGCAAACAATGGGAAACGGTCAAATTTATGGAACTTCTCGCCAAAGTGAAGCAGCAAATAGTGGATCTCAAGGGGCATATTCTCAAATCCGTTCTGGCTCTGTTCCTGTCGGATTTTATGCATTGCAGAGGGACAACATATTTCCTGAAAGACCTGGTCAGCCTGAATGCCAATTCTACATGAAGACTGGAGACTGTAAGTTTGGTGCAGTCTGTCGGTTCCATCATCCACGTGAGAGGATGATTCCATCTCCTGACTGTGTATTGAGTCCCATAGGTCTTCCTTTACGTTCAGGAGAGCCTTTATGTGTCTTCTATTCACGGTATGGAATCTGTAAATTTGGACCAAGTTGCAAGTTTGATCACCCTATGGGAATATTCACCTATAATCTATCTGCATCACCTTCGGCTGATGCACCAGTCCGGCATTTGTTGGGGTCATCATCCGGAACTGCTGCATTAAATTTATCATCTGAAGGACTTGTTGAATCAGGCTCCACAAAGCCCAGGCGGCTTTCACTTTCAGAGACAAGACAAATTCCTTCTGGTGATGATAATATTGATGATAGGGATGAATGATGTCTCTTAGAAATGGGTCATTTGCCTTTTTTCAATTTTTTTTGGGGATAAACGAGTAATCTGTAAATTCATTTTCCCATTGCTGGAAATGTACAGAGTTCATTGTCAAATTGATTCTGTCAAGCTGAAACGGCATGCAGTTGACAGACTCTACTCATCTGGATTTCATGTTGCCACATTGTATAAATTCAGCAAATATTGTCACATTTGGTCAAATACAATGTGAACTTTTC 1694 0.4433 MEFDAAIPISRAGLTDPSSLSPSLTATQDAMWQMKFRSGETMDSGPYPERPGELDCSYYIRTGLCRFGATCRFNHPPNRRLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPEEPECAYYLRTGQCKYGSTCKFHHPQPTNMMVSLRGSPVYPSIHSPTTPGQQSYAGGITNWSRASYIPSPRWQGPSSYASLILPQGVVSVPGWSAYSGQMGSISTPDSPQQTMGNGQIYGTSRQSEAANSGSQGAYSQIRSGSVPVGFYALQRDNIFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERMIPSPDCVLSPIGLPLRSGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYNLSASPSADAPVRHLLGSSSGTAALNLSSEGLVESGSTKPRRLSLSETRQIPSGDDNIDDRDE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03422 443 SUPERFAMILY CCCH zinc finger 142 169 IPR036855 GO:0046872
Bach1g03422 443 FunFam Zinc finger nuclease 2 49 126 - -
Bach1g03422 443 PANTHER PROTEIN PHOSPHATASE RELATED 29 394 - -
Bach1g03422 443 MobiDBLite consensus disorder prediction 411 432 - -
Bach1g03422 443 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 350 375 IPR000571 GO:0046872
Bach1g03422 443 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 143 168 IPR000571 GO:0046872
Bach1g03422 443 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 304 329 IPR000571 GO:0046872
Bach1g03422 443 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 98 122 IPR000571 GO:0046872
Bach1g03422 443 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 55 77 IPR000571 GO:0046872
Bach1g03422 443 SUPERFAMILY CCCH zinc finger 352 375 IPR036855 GO:0046872
Bach1g03422 443 SMART c3hfinal6 50 77 IPR000571 GO:0046872
Bach1g03422 443 SMART c3hfinal6 141 168 IPR000571 GO:0046872
Bach1g03422 443 SMART c3hfinal6 348 375 IPR000571 GO:0046872
Bach1g03422 443 SMART c3hfinal6 95 122 IPR000571 GO:0046872
Bach1g03422 443 SMART c3hfinal6 302 329 IPR000571 GO:0046872
Bach1g03422 443 MobiDBLite consensus disorder prediction 243 278 - -
Bach1g03422 443 FunFam CCCH type zinc finger protein 300 387 - -
Bach1g03422 443 SUPERFAMILY CCCH zinc finger 306 331 IPR036855 GO:0046872
Bach1g03422 443 ProSiteProfiles Zinc finger C3H1-type profile. 95 123 IPR000571 GO:0046872
Bach1g03422 443 Gene3D - 127 177 - -
Bach1g03422 443 MobiDBLite consensus disorder prediction 411 443 - -
Bach1g03422 443 Gene3D - 51 126 - -
Bach1g03422 443 Gene3D - 301 377 - -
Bach1g03422 443 ProSiteProfiles Zinc finger C3H1-type profile. 348 376 IPR000571 GO:0046872
Bach1g03422 443 ProSiteProfiles Zinc finger C3H1-type profile. 50 78 IPR000571 GO:0046872
Bach1g03422 443 ProSiteProfiles Zinc finger C3H1-type profile. 141 169 IPR000571 GO:0046872
Bach1g03422 443 SUPERFAMILY CCCH zinc finger 99 124 IPR036855 GO:0046872
Bach1g03422 443 ProSiteProfiles Zinc finger C3H1-type profile. 302 330 IPR000571 GO:0046872
Bach1g03422 443 SUPERFAMILY CCCH zinc finger 55 78 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03422 Bach-Chr1 42667060 42671894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03422 31 443 C2H2 Transcription Factor Family AT3G02830 62.559 3.33e-178 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach1g03422 zf-CCCH 7.7e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03422 - - gmx:100786261 803.127