Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach1g03422 | GACCTTTCTAAAATAGAAATATTCTCTCTTTCTTCCTTTTTCGTTGGGTGATCGTCGGAGTCGGAGGGAATGGGAATACCGGCGGGCTTCTCTGGAGTGACTGATTGGTGATATGGAGAACAGAAGCTCATGGAATTCGATGCCGCAATTCCGATTTCCCGAGCGGGCCTCACCGACCCATCCTCCTTGTCACCGTCCCTCACCGCCACCCAAGATGCAATGTGGCAAATGAAATTCAGATCAGGAGAAACAATGGACTCTGGACCTTATCCTGAGCGTCCAGGAGAACTGGATTGTTCATATTACATCAGAACAGGCCTTTGTAGATTTGGAGCAACATGTCGATTTAATCATCCACCTAACAGGAGACTGGCTATTGCTGCTGCAAGGATGAAAGGTGAGTTCCCAGAAAGAATAGGGCAACCAGAATGTCAGTACTATCTGAAGACAGGAACTTGCAAATTTGGGGCCACATGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATCGCTGGAAGAGTTGCCTTAAATATTTTAGGCTATCCACTTCGCCCTGAAGAACCTGAGTGTGCTTATTATTTGAGAACTGGACAATGCAAATATGGGAGCACTTGCAAATTCCATCATCCTCAACCAACTAACATGATGGTTTCATTGCGGGGTTCTCCTGTTTATCCTAGTATCCATTCTCCAACTACACCCGGTCAGCAGTCGTATGCAGGGGGAATTACAAATTGGTCCCGAGCATCTTATATTCCTAGTCCACGTTGGCAAGGTCCTTCAAGTTATGCTTCTCTAATTCTACCCCAGGGAGTGGTTTCAGTGCCTGGATGGAGTGCCTACAGTGGTCAGATGGGATCAATCTCTACACCGGACAGTCCACAGCAAACAATGGGAAACGGTCAAATTTATGGAACTTCTCGCCAAAGTGAAGCAGCAAATAGTGGATCTCAAGGGGCATATTCTCAAATCCGTTCTGGCTCTGTTCCTGTCGGATTTTATGCATTGCAGAGGGACAACATATTTCCTGAAAGACCTGGTCAGCCTGAATGCCAATTCTACATGAAGACTGGAGACTGTAAGTTTGGTGCAGTCTGTCGGTTCCATCATCCACGTGAGAGGATGATTCCATCTCCTGACTGTGTATTGAGTCCCATAGGTCTTCCTTTACGTTCAGGAGAGCCTTTATGTGTCTTCTATTCACGGTATGGAATCTGTAAATTTGGACCAAGTTGCAAGTTTGATCACCCTATGGGAATATTCACCTATAATCTATCTGCATCACCTTCGGCTGATGCACCAGTCCGGCATTTGTTGGGGTCATCATCCGGAACTGCTGCATTAAATTTATCATCTGAAGGACTTGTTGAATCAGGCTCCACAAAGCCCAGGCGGCTTTCACTTTCAGAGACAAGACAAATTCCTTCTGGTGATGATAATATTGATGATAGGGATGAATGATGTCTCTTAGAAATGGGTCATTTGCCTTTTTTCAATTTTTTTTGGGGATAAACGAGTAATCTGTAAATTCATTTTCCCATTGCTGGAAATGTACAGAGTTCATTGTCAAATTGATTCTGTCAAGCTGAAACGGCATGCAGTTGACAGACTCTACTCATCTGGATTTCATGTTGCCACATTGTATAAATTCAGCAAATATTGTCACATTTGGTCAAATACAATGTGAACTTTTC | 1694 | 0.4433 | MEFDAAIPISRAGLTDPSSLSPSLTATQDAMWQMKFRSGETMDSGPYPERPGELDCSYYIRTGLCRFGATCRFNHPPNRRLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPEEPECAYYLRTGQCKYGSTCKFHHPQPTNMMVSLRGSPVYPSIHSPTTPGQQSYAGGITNWSRASYIPSPRWQGPSSYASLILPQGVVSVPGWSAYSGQMGSISTPDSPQQTMGNGQIYGTSRQSEAANSGSQGAYSQIRSGSVPVGFYALQRDNIFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERMIPSPDCVLSPIGLPLRSGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYNLSASPSADAPVRHLLGSSSGTAALNLSSEGLVESGSTKPRRLSLSETRQIPSGDDNIDDRDE | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach1g03422 | 443 | SUPERFAMILY | CCCH zinc finger | 142 | 169 | IPR036855 | GO:0046872 | |
Bach1g03422 | 443 | FunFam | Zinc finger nuclease 2 | 49 | 126 | - | - | |
Bach1g03422 | 443 | PANTHER | PROTEIN PHOSPHATASE RELATED | 29 | 394 | - | - | |
Bach1g03422 | 443 | MobiDBLite | consensus disorder prediction | 411 | 432 | - | - | |
Bach1g03422 | 443 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 350 | 375 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 143 | 168 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 304 | 329 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 98 | 122 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 55 | 77 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | SUPERFAMILY | CCCH zinc finger | 352 | 375 | IPR036855 | GO:0046872 | |
Bach1g03422 | 443 | SMART | c3hfinal6 | 50 | 77 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | SMART | c3hfinal6 | 141 | 168 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | SMART | c3hfinal6 | 348 | 375 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | SMART | c3hfinal6 | 95 | 122 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | SMART | c3hfinal6 | 302 | 329 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | MobiDBLite | consensus disorder prediction | 243 | 278 | - | - | |
Bach1g03422 | 443 | FunFam | CCCH type zinc finger protein | 300 | 387 | - | - | |
Bach1g03422 | 443 | SUPERFAMILY | CCCH zinc finger | 306 | 331 | IPR036855 | GO:0046872 | |
Bach1g03422 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 95 | 123 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | Gene3D | - | 127 | 177 | - | - | |
Bach1g03422 | 443 | MobiDBLite | consensus disorder prediction | 411 | 443 | - | - | |
Bach1g03422 | 443 | Gene3D | - | 51 | 126 | - | - | |
Bach1g03422 | 443 | Gene3D | - | 301 | 377 | - | - | |
Bach1g03422 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 348 | 376 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 50 | 78 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 141 | 169 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | SUPERFAMILY | CCCH zinc finger | 99 | 124 | IPR036855 | GO:0046872 | |
Bach1g03422 | 443 | ProSiteProfiles | Zinc finger C3H1-type profile. | 302 | 330 | IPR000571 | GO:0046872 | |
Bach1g03422 | 443 | SUPERFAMILY | CCCH zinc finger | 55 | 78 | IPR036855 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach1g03422 | Bach-Chr1 | 42667060 | 42671894 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach1g03422 | 31 | 443 | C2H2 Transcription Factor Family | AT3G02830 | 62.559 | 3.33e-178 | 501 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Bach1g03422 | zf-CCCH | 7.7e-09 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach1g03422 | - | - | gmx:100786261 | 803.127 |