Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03401 ATGAATTGCTTCCCGTGTTTTTCATCTCAGAGAAGTAAGAAAAACCTTAGCAAGAAGGAGCATGGCTCTTCCCCACCAGACAACAACGGTCCACCACCAAAACCAGCGGAAGTAAATAAGCCAAAGGTTAATGAGCCCCAAGGACAATATGAACAGCCAGCAAATATTCAAGCACAAAATTTCACTTTCCGTGAGCTAGCAACTGCAACTAAGAATTTCCGCCAGGAATGCCTCCTGGGTGAAGGTGGATTTGGCAGAGTCTACAAGGGCACAATTGCAAAAACTGGGCAGGTGGTAGCTGTTAAGCAACTTGATCGAAATGGTTTGCAAGGCAACAAGGAATTCCTGGCTGAGATTTTGACGCTAAGTCTGCTGCACCATGAAAATCTTGTCAATCTCGTTGGTTATTGTGCTGATGGTGATCAACGCCTTTTGGTGTATGAATTTATTTCAGGGGGTTCTCTAGAAGACCGTCTTTTTGGGAGTGGAGATAAGGCACCTTTAGATTGGTTCACGAGAATGAAAGCACAACCCTTATTCAGAGACCCAAAGAAGTTCCCGGATATGGCAGATCCACGACTTCGTAAACATTTCCCAGAAAAGGATTTGAATCAAGCAGTTGCTATATCAGCCATGTGTCTGCAAGAGGAAGCAGCAGCTCGTCCCTTAATGAGTGACGTTGTAACTGCTTTGAGTTTCCTTTCCATGGTTCCTCCAGAGGTTATTCCTGCCTGGTCTTCTCAAGAGAGTGTTACTAGTGATGGCCTTACTCCTGCTCATAGTCAAGAAACCAAGAACGTGTGCTCCAAATCAAGCCGCAAAAGCAGCAAGAGATCAAGGAATGGAAGCATTTCATCCAGCCAGAGAAGCAGCCCTACTTCTTCTGAAGATGGAAGTGTTTCTTCCAGCCACAAGAGCAGTAGAAAATTTCAGGGTAAGAGCAGCAGAAAATCTTCTGTCAAAGCTTTAAGCCACAAGAGTAGCATGGAATCGGAGGATGAATTCCAAACGTATGAGCACAGCGAGAGCAAGGCATCACATTACAGCAGCGGTGAATCAGAGGATGAACATGGTTCATATGAAGATGATGAGGAGTGA 1098 0.4499 MNCFPCFSSQRSKKNLSKKEHGSSPPDNNGPPPKPAEVNKPKVNEPQGQYEQPANIQAQNFTFRELATATKNFRQECLLGEGGFGRVYKGTIAKTGQVVAVKQLDRNGLQGNKEFLAEILTLSLLHHENLVNLVGYCADGDQRLLVYEFISGGSLEDRLFGSGDKAPLDWFTRMKAQPLFRDPKKFPDMADPRLRKHFPEKDLNQAVAISAMCLQEEAAARPLMSDVVTALSFLSMVPPEVIPAWSSQESVTSDGLTPAHSQETKNVCSKSSRKSSKRSRNGSISSSQRSSPTSSEDGSVSSSHKSSRKFQGKSSRKSSVKALSHKSSMESEDEFQTYEHSESKASHYSSGESEDEHGSYEDDEE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03401 365 ProSiteProfiles Protein kinase domain profile. 73 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g03401 365 MobiDBLite consensus disorder prediction 251 269 - -
Bach1g03401 365 Gene3D Transferase(Phosphotransferase) domain 1 147 237 - -
Bach1g03401 365 Pfam Protein tyrosine and serine/threonine kinase 77 172 IPR001245 GO:0004672|GO:0006468
Bach1g03401 365 MobiDBLite consensus disorder prediction 1 48 - -
Bach1g03401 365 MobiDBLite consensus disorder prediction 326 355 - -
Bach1g03401 365 Gene3D Phosphorylase Kinase; domain 1 44 146 - -
Bach1g03401 365 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Bach1g03401 365 MobiDBLite consensus disorder prediction 251 365 - -
Bach1g03401 365 MobiDBLite consensus disorder prediction 278 308 - -
Bach1g03401 365 PANTHER OS07G0668900 PROTEIN 176 237 - -
Bach1g03401 365 FunFam probable serine/threonine-protein kinase RLCKVII 45 149 - -
Bach1g03401 365 SUPERFAMILY Protein kinase-like (PK-like) 59 175 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03401 Bach-Chr1 42538698 42540912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03401 135 238 Glycoside Hydrolase AT3G07070 45.763 9.28e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bach1g03401 PK_Tyr_Ser-Thr 6.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03401 - - qsa:O6P43_007722 232.646