Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03398 ATGGGTGGCGTTGCATGGACCGAAGAAGAAGATCTACTCCTTAAGAAATGCATTCAACAGTATGGGGAAGGAAAGTGGCATCGTGTTCCTCTCTTGGCTGGTCTAAACAGATGCCGAAAGAGCTGCAGGCTAAGGTGGTTAAACTATCTTCGTCCCAACATCAAAAGAGGAAGCTTTACCGAAGAAGAAGTGGAAATGATAATTAAACTCCATAAACAGTTGGGCAACAGATGGTCACTAATCGCGGGAAGGCTACCGGGAAGGACTGCCAACGATGTAAAGAACTACTGGAACTGTCATTTAAGCAAAAAGCTAAATGCTCAAGAAGGTGAAGAGAGACAAATGAGCAGAAATAATGCTCAAGTCATCAAGCCACATCAGCTTCGAAACATTGCTGCTGCTTCAACTTCAGGAATCAAGCTACAGAGTGGGCCGCCGGATGAGAATGGGTACTCTCCAGCTGCCCCACTAAAGAGAGGCATGGCAATGCCCTCACCGACCGTGTTTAATGGTGATGCAGATCATCAAGGTCACATGTTACCAATGCAAACAAAGGAGGACAGTACTGTCAATGTTTCTTGCTTGGACCAACAAGGAATTGGATCAGTTGTTGGTGATCAGCTCCCAACGGACTTACACTTTGAACAAGTTGAATCAACCAAGGATTTCAAAGACGGCTGCAATAAATGGGACTGGGATGACTTGCTCGCGGACATGGATCTGTATAATGATTCTTTGTGA 741 0.4534 MGGVAWTEEEDLLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGSFTEEEVEMIIKLHKQLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNAQEGEERQMSRNNAQVIKPHQLRNIAAASTSGIKLQSGPPDENGYSPAAPLKRGMAMPSPTVFNGDADHQGHMLPMQTKEDSTVNVSCLDQQGIGSVVGDQLPTDLHFEQVESTKDFKDGCNKWDWDDLLADMDLYNDSL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03398 246 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Bach1g03398 246 SUPERFAMILY Homeodomain-like 5 97 IPR009057 -
Bach1g03398 246 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 123 - -
Bach1g03398 246 SMART sant 2 52 IPR001005 -
Bach1g03398 246 SMART sant 55 103 IPR001005 -
Bach1g03398 246 ProSiteProfiles Myb-like domain profile. 6 50 IPR001005 -
Bach1g03398 246 Gene3D - 57 127 - -
Bach1g03398 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Bach1g03398 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Bach1g03398 246 Gene3D - 4 55 - -
Bach1g03398 246 CDD SANT 58 101 IPR001005 -
Bach1g03398 246 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Bach1g03398 246 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Bach1g03398 246 CDD SANT 5 50 IPR001005 -
Bach1g03398 246 FunFam Myb transcription factor 3 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03398 Bach-Chr1 42524033 42525122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03398 5 118 MYB Transcription Factor Family AT1G66370 68.421 1.24e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g03398 Myb_DNA-binding 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03398 K09422 - gmx:100798101 272.707