Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03396 ATGGCCAAGACTGCGGAAAACGAGCCAAACGCCTTGGAGTTAAAGGACAAATTGCGGGGACTCGTAAATAGTATCGTAGACGACGACGATTTTCCGGTAGAGGCCGCCAATGAAGCTATTAGGACGCTAGCTACTCTGAAGGATTTGAAATTAAAGAGGTCGCTCTCTCAGAAATTGGATGAATTAGTCGTTCCTCCGGAATTCCGTTGCCCTATTTCAAGAGAGTTAATGAAGGATCCTGTCATCTTGGCTACTGGACAGACTTATGATCGATCCTTCATCCAGAGGTGGTTGAATGAAGGGAACAGAACATGCCCTCAAACCCAGCAGGTCCTCTCTCATTCCGTCCTTACTCCTAATTATTTAGTCCGAGACATGATTTCACAGTGGTGCAGAGAGAATGGCATTGAGCTGCCAAAAACTGATCGAGATGTTGACGAAGAAGTGATAACTGATGCAGATAGGGACCGTTTGAATTCATTGCTTTCTAAGTTGTCATTGTCTCTTCCCTATCAGAAAGAAGCTGCAAAAGAGCTTCGGCAACTAACAAAACGAATTCCTTCATTCCGAACCCTTTTTGGGGAGTCCATTGATGTGATTCCACAGTTACTGAGTCCATTATCACCTGGCAAGGCGCATATACATCCTGATCTCCATGAGGACTTGATAACAACTGTTCTAAATCTGTCAATTCATGATGACAACAAGAAAAGATTAGCAGAGGATTCAAGGGTCATTCCTTTGCTTATTGATTCTTTGAAATCTGGAACCATTCAAACAAGAAGTAATGCTGCTGCAGCTATTTTCACATTATCTTCTATTGATACCAACAAACTCCTGATAGGGAAATCTGAAGCTATTAAACATTTGATTGACCTTTTAGAGGAGGGACATCCATTGGCCATGAAAGATGCGGCCTCAGCCATATTTAGCCTATGTCTTGTGCATGAAAACAAGGGGAGGACCGTCCGTGAAGGGGCAGTGCAGGTTATTCTGAACAAGGCCATGAATCACATTCTAGTTGATGAATTGTTGGCTGTATTGGCTCTCCTCTCTAGCCATCCAAAGGCGGTTGAAGAAATGGGTCATCTTGGTGCTGTTACCTTCTTGCTCAATGTGATAAGGGAGAGCACTTCAGAACGAAGTAAAGAAAACTGTGTTGCAATACTTCATACAATCTGTTTCAACGATAGAACAAAATGGAAGGAAATTAGGGAAGATGAAAAAGCCAACGGCACGCTTTCTAATCTAGCTCAAAGTGGAACTTCAAGGGCCAAAAGGAAAGCTAATGGTATTCTTGACAGGCTCAAGAAATCTCCCTCCTTAACACACACTGCTTAGTGAACATTACAATATACTTTCTTGTAAGTAAATTTCTCATGTGGTTCTGTAAAATAGAGAAATAAAGTTCATATATTACATGCCTTAGAC 1431 0.4193 MAKTAENEPNALELKDKLRGLVNSIVDDDDFPVEAANEAIRTLATLKDLKLKRSLSQKLDELVVPPEFRCPISRELMKDPVILATGQTYDRSFIQRWLNEGNRTCPQTQQVLSHSVLTPNYLVRDMISQWCRENGIELPKTDRDVDEEVITDADRDRLNSLLSKLSLSLPYQKEAAKELRQLTKRIPSFRTLFGESIDVIPQLLSPLSPGKAHIHPDLHEDLITTVLNLSIHDDNKKRLAEDSRVIPLLIDSLKSGTIQTRSNAAAAIFTLSSIDTNKLLIGKSEAIKHLIDLLEEGHPLAMKDAASAIFSLCLVHENKGRTVREGAVQVILNKAMNHILVDELLAVLALLSSHPKAVEEMGHLGAVTFLLNVIRESTSERSKENCVAILHTICFNDRTKWKEIREDEKANGTLSNLAQSGTSRAKRKANGILDRLKKSPSLTHTA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03396 446 SUPERFAMILY ARM repeat 158 436 IPR016024 -
Bach1g03396 446 PANTHER U BOX DOMAIN-CONTAINING 18 435 - -
Bach1g03396 446 SUPERFAMILY RING/U-box 61 139 - -
Bach1g03396 446 CDD RING-Ubox_PUB 65 117 IPR045210 -
Bach1g03396 446 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 137 IPR013083 -
Bach1g03396 446 Gene3D - 168 441 IPR011989 -
Bach1g03396 446 Pfam U-box domain 64 134 IPR003613 GO:0004842|GO:0016567
Bach1g03396 446 FunFam RING-type E3 ubiquitin transferase 148 441 - -
Bach1g03396 446 ProSiteProfiles U-box domain profile. 63 137 IPR003613 GO:0004842|GO:0016567
Bach1g03396 446 SMART Ubox_2 67 130 IPR003613 GO:0004842|GO:0016567
Bach1g03396 446 FunFam RING-type E3 ubiquitin transferase 63 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03396 Bach-Chr1 42514064 42516176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03396 126 446 U-box Gene Family AT3G07360 59.146 1.88e-128 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03396 - - qsa:O6P43_011290 613.609