Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03390 ATGGACATTGAGAAAGTGAAATTAGAAGAAGAAGTGGGAAATAGAGCAAGAAAGGGGAAGTCCAGAAAAGGGTGCATGAAAGGGAAAGGGGGTCCTGAGAATGCCCTGTGTACTTACAGAGGAGTGAGACAGAGAACTTGGGGGAAATGGGTGGCCGAGATACGAGAGCCGAACCGTGGAGCTAGGCTTTGGCTTGGCACTTTTAACAGCTCCACAGAACCAGCACTTGCTTATGATGAAGCAGCAAGAAAACTTTATGGCTCCTCTGCTAAGCTCAATTTACCAGTAAGCCACAACCACGACCCATCACCCTCTTGTGCACCCCCTGCCTCTAGCGAAGGAGCTGAGAATGAGATTCTGATGTCTGCGGAAGCTGCCTCACCGAGCTTATTCATCTCTGACCAGACAACAGCCACTTCGGTGCTCGGTCTTGGGGACATCTGGGAGACTTTGGACCGTCATGCACCTACCACCCCCTGGATTACTGATTTTATGGAACCTAATCACACATTCGATCAAGAGCTTAAGGATTGGAATGGATTACTGCAACTCCCTTTTGGCAGCTAG 567 0.4938 MDIEKVKLEEEVGNRARKGKSRKGCMKGKGGPENALCTYRGVRQRTWGKWVAEIREPNRGARLWLGTFNSSTEPALAYDEAARKLYGSSAKLNLPVSHNHDPSPSCAPPASSEGAENEILMSAEAASPSLFISDQTTATSVLGLGDIWETLDRHAPTTPWITDFMEPNHTFDQELKDWNGLLQLPFGS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03390 188 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Bach1g03390 188 CDD AP2 37 97 IPR001471 GO:0003700|GO:0006355
Bach1g03390 188 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Bach1g03390 188 FunFam Ethylene-responsive transcription factor 2 37 96 - -
Bach1g03390 188 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Bach1g03390 188 PRINTS Ethylene responsive element binding protein signature 77 97 IPR001471 GO:0003700|GO:0006355
Bach1g03390 188 MobiDBLite consensus disorder prediction 1 29 - -
Bach1g03390 188 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Bach1g03390 188 MobiDBLite consensus disorder prediction 1 18 - -
Bach1g03390 188 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 17 116 - -
Bach1g03390 188 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Bach1g03390 188 SUPERFAMILY DNA-binding domain 38 97 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03390 Bach-Chr1 42469001 42469567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03390 15 117 AP2-EREBP Transcription Factor Family AT1G75490 66.019 7.98e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach1g03390 AP2 2.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03390 - - pdul:117630741 157.918