Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03387 ATGGCTTCTCTAAGTTGCTCAGTCTCCGAACTGGCCCCGCTCTTCAGCACCTCCACAAACGCAACCACCGCAGCCAACTATCTGTGCTCCCAATTTGATTTCATTTCCAAAAAGCTTAATGACACTACCTATGCTGTTGACAACACCTACCTTCTCTTCTCAGCCTATCTTGTGTTCGCCATGCAGCTTGGTTTTGCAATGCTCTGCGCTGGTTCGGTTCGCGCAAAGAACACCATGAACATCATGCTCACCAATGTTCTAGACGCCGCCGCGGGTGGCCTCTCCTACTACCTTTTCGGTTTCGCTTTTGCGTTTGGTTCACCCTCCAACGGCTTTATAGGGCGCCACTTGTTTGGTCTGAAAGATTACCCTTCCCCTTCTAGGGACTACAGCTTCTTCCTCTATCAATGGGCTTTTGCAATTGCAGCCGCTGGGATTACTAGCGGTTCTATCGCTGAGAGAACCCAATTCGTGGCTTATCTTATTTACTCCTCCTTTTTGACGGGCTTCGTCTATCCCATCGTTTCTCATTGGTTCTGGTCGGGTGATGGGTGGGCCAGCCCAACTCGAACCGGTAATAACCTTTTATTAGGATCAGGTGCTATTGACTTCGCTGGTTCGGGTGTGGTTCATATGGTTGGCGGCATAGCAGGGTTGTGGGGTGCTCTCATTGAAGGACCAAGAATTGGCCGGTTCGACCGGAGCGGACGGTCTGTGGCCTTGCGTGGCCACAGTGCTTCCCTGGTGGTTCTCGGCTCCTTTCTACTATGGTTCGGATGGTACGGCTTCAACCCAGGCTCGTTCCTGACCATCTCGAAATCGTACGGTGACGAAGGGTATTATGGTCAATGGAGCGCCATAGGGAGGACAGCTGTGACAACGACACTGGCTGGGTGCACAGCAGCTCTCACTACGTTATTTGGTAAACGGTTATTGGTTGGACACTGGAACGTCAGTGACGTGTGTAACGGTCTGCTCGGGGGTTTTGCTGCGATCACGTCAGGGTGTTCGGTGGTGGAACCATGGGCAGCAATCGTCTGCGGGTTTGTGGCGGCTTGGGTTCTGATAGGGTTCAACAAGTTAGCAGTGAGGGTCAAGTACGACGACCCACTAGAGGCGGCGCAACTCCATGGAGGGTGTGGCGCGTGGGGTTTGTTGTTCACGGGATTGTTTGCGAAGGAGGGTTACGTGAATCAAGTGTTCGGAGGAGGGAGACCGTACGGGTTACTAATGGGGGGAGGAGGGAAGCTGTTGGGGGCGCAGATAGTGGAGATAGTGGTGGTGAGTGGGTGGGTGACGGCGACGATGGCTCCACTGTTTTATGGGTTGAAGAAGATGAAGTTGTTGAGGATATCAAGTGAGGATGAGATGGCGGGGATGGACTCCACTCGCCATGGTGGCTTTGCTTATGCCTACCATGATGAACGGGATGGTGATGGTGATTCAACTAGGCCTTCCTTGTTTATGATGGGGAAGATAGAGCCTGCTATTGAGACTCCCACATCTCATCCATCACCAGATTCACCACCGCAACCACAACCTCAAACCCATGCATATCAGGTTTGA 1566 0.5249 MASLSCSVSELAPLFSTSTNATTAANYLCSQFDFISKKLNDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHLFGLKDYPSPSRDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSGDGWASPTRTGNNLLLGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISKSYGDEGYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVSDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGFNKLAVRVKYDDPLEAAQLHGGCGAWGLLFTGLFAKEGYVNQVFGGGRPYGLLMGGGGKLLGAQIVEIVVVSGWVTATMAPLFYGLKKMKLLRISSEDEMAGMDSTRHGGFAYAYHDERDGDGDSTRPSLFMMGKIEPAIETPTSHPSPDSPPQPQPQTHAYQV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03387 521 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bach1g03387 521 MobiDBLite consensus disorder prediction 493 521 - -
Bach1g03387 521 Pfam Ammonium Transporter Family 50 470 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bach1g03387 521 PANTHER AMMONIUM TRANSPORTER 18 473 - -
Bach1g03387 521 Gene3D Ammonium transporter AmtB like domains 24 485 IPR029020 -
Bach1g03387 521 NCBIfam ammonium transporter 47 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bach1g03387 521 SUPERFAMILY Ammonium transporter 44 451 - -
Bach1g03387 521 FunFam Ammonium transporter 28 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03387 Bach-Chr1 42447872 42449437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03387 26 505 Inorganic Solute Cotransporters AT1G64780 80.785 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03387 K03320 K07573 rcu:8258661 815.453