Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03362 ATGGTGAGGACTCCTTGCTGTGAGAAGATGGGATTGAAGAAGGGGCCATGGACTCCTGAAGAAGATCAAGTATTGATTTCTTATATTCAAAGGTATGGCCATGGAAACTGGCGGGCGCTACCAAAACAAGCTGGTCTGTTAAGATGTGGTAAGAGTTGCAGGCTTCGTTGGATAAATTATCTGAGGCCAGATATTAAACGAGGCAAGTTCAGCAAGGAAGAAGAAGACGCCATCCTCAAGCTGCATCAAATCCTTGGAAACAGATGGTCTGCTATTGCGGCCAGATTACCAGGACGAACAGACAATGAAATAAAGAATTTTTGGCATACCCACTTGAAGAAGAGACTTGAAAGAAAGGAAGTAGGCCCTGTTAATACCTCTTCCACAAGTCCCTTGCAACAAGGTCAAGTATCTTCTAGTTCGGATGCTTTGAATCTGATGGCTATGCCTATGGCACAGCCATCAGATGTAAGAATGGGTGCAACAAGTGCTGCTTCTATTGTTAATGGGAGTGCTAATGATGGTTCAGCATCTAGGAGATATCTACCTATTACAGATCAAGGATTTCAATGTGCAGTTGCGGTGTCTTCTGATGTCTCAGCTGAGCAAACCATGGCTAATCAAAATTCCACTAAGTTAAGTGAAGAAATGCAATTTTGGTACAATCTATTCATGAAAGCAGGACAGCCATCACAAGGACATGGAGAGATAAGATAG 717 0.4296 MVRTPCCEKMGLKKGPWTPEEDQVLISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDAILKLHQILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRLERKEVGPVNTSSTSPLQQGQVSSSSDALNLMAMPMAQPSDVRMGATSAASIVNGSANDGSASRRYLPITDQGFQCAVAVSSDVSAEQTMANQNSTKLSEEMQFWYNLFMKAGQPSQGHGEIR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03362 238 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach1g03362 238 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach1g03362 238 CDD SANT 69 112 IPR001005 -
Bach1g03362 238 CDD SANT 16 61 IPR001005 -
Bach1g03362 238 FunFam MYB transcription factor 69 116 - -
Bach1g03362 238 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Bach1g03362 238 FunFam MYB-related transcription factor 13 66 - -
Bach1g03362 238 Gene3D - 13 66 - -
Bach1g03362 238 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach1g03362 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach1g03362 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach1g03362 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 203 - -
Bach1g03362 238 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach1g03362 238 Gene3D - 68 136 - -
Bach1g03362 238 SMART sant 13 63 IPR001005 -
Bach1g03362 238 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03362 Bach-Chr1 42320807 42321847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03362 1 224 MYB Transcription Factor Family AT2G31180 47.581 6.10e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g03362 Myb_DNA-binding 7.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03362 K09422 - gmx:102663040 270.011