Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03342 ATGGCTATTCCTGCTGTGTCCAAGGCCAAGAAACCAGCCGCATCGAAGAAGCCTAAGTCGTCGCCGTCGCACCCTCCCTTCGTGGATATGATAACGGATGCGATTGTAACTCTCAAGGAGAGGACCGGCTCAAGCCAGTATGCCATCACCAAGTTTATTGAGGAGAAGCACAAGCAGCTGCCACCCAATTTTAGGAAGCTTTTGCTTTATCATCTGAAAAAATCGGTGGGTGCTGGTAAGCTTGTCAAGGTCAAGAATTCGTTCAAGCTTCCACCAACTCGATCAGTTCCCACCAAGGCATCCGCCCCTTCTGCAAAAGTTGTGGCTAAGGCCGCATCCAACCCGAAACCTAAAGCTGCCGCCAAGCCGAAGGAAGCTGCTAAACCTAAAGCCATTGCCAAGAAGAAAACCGCTGCCAAAAGTGCCAAAGCATCCGCGAAGCCCAAGGTCTCAGCGAAACCTAAAGCGAAGGCAACGGCAAAGCCGGCTAAGGTGGCTAAGACATCGACAAAAGCTTCACCAGGGAAGAAGGTTGCCAAGGCAGCAAAGAAGGCGCCGCTAAGGAACGTGAAGAAGCCCAGGAGTGTGAAATCACCGGTAAAGAAAGCACCGGCAAAGAAGGCTAGGAAGTAA 633 0.515 MAIPAVSKAKKPAASKKPKSSPSHPPFVDMITDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFRKLLLYHLKKSVGAGKLVKVKNSFKLPPTRSVPTKASAPSAKVVAKAASNPKPKAAAKPKEAAKPKAIAKKKTAAKSAKASAKPKVSAKPKAKATAKPAKVAKTSTKASPGKKVAKAAKKAPLRNVKKPRSVKSPVKKAPAKKARK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03342 210 PRINTS Histone H5 signature 157 174 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach1g03342 210 PRINTS Histone H5 signature 37 54 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach1g03342 210 PRINTS Histone H5 signature 118 132 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach1g03342 210 PRINTS Histone H5 signature 10 31 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach1g03342 210 PRINTS Histone H5 signature 179 198 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach1g03342 210 MobiDBLite consensus disorder prediction 177 210 - -
Bach1g03342 210 FunFam Histone H1 18 128 - -
Bach1g03342 210 CDD H15 29 103 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach1g03342 210 PANTHER HISTONE H1 10 207 - -
Bach1g03342 210 Gene3D - 19 96 IPR036388 -
Bach1g03342 210 SMART h15plus2 21 87 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach1g03342 210 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 23 92 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach1g03342 210 Pfam linker histone H1 and H5 family 24 90 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach1g03342 210 SUPERFAMILY "Winged helix" DNA-binding domain 20 102 IPR036390 -
Bach1g03342 210 MobiDBLite consensus disorder prediction 1 28 - -
Bach1g03342 210 MobiDBLite consensus disorder prediction 91 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03342 Bach-Chr1 42174735 42175475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03342 30 91 Single Myb Histone (SMH) Gene Family AT1G49950 41.935 4.08e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03342 K11275 - cpap:110811938 139.043