Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03333 CCGAAACCAAATTAGTTTGTGATCTTCACTCTTTGAGAATTTCTTCTCCCGACCCAGCATTAAAAAACTTGACTTTTTTTAGTTAGCCTGAGCCAATAACAGAGAAAGCCAAAGGCTGCGCCTGTGCTTGTGTGTCTATAACAGCCAACATCTGAAGTTGAAGCTGATTGAGGGTACTAACTGCTCCAGGTAAAAGCAGAGAGAGAATTGCGACTGTTGTTAAAATTTGCGATAGAATGACAAGCAGAGTGGAGGCAGAGCGGGACAAGTACAGTATGATTAATTTTGAAGAAACTGAATTGCGACTGGGCATGCCTGGTGCCTCTGCAAATGACTCTGATTGTGGCTTCAAGAGCAATTGTTGTACTAATGCTACTGCTCATAGCAAGAGAAGTTTCTCCGAGACTAGCACTACTACCGCTGTTGATTTGAAGCTCAATCTTTCCAGCTCAAACAATGACTTGCCCTCACACTCGACTCTCACACAACAAAAGCCTAAAGACAACGCCACTGCTCCTCGCGCTAACGACCCAGCAAAGCCACCTGCAAAGGCACAAGTGGTGGGTTGGCCACCAGTCCGATCATTCAGAAAGAATATAGTGTCGGCACAAAAGAACAATGGTGATGAAACAGAGAAAGGCAGTGGTAGCAACCGCAATAACAGCAACAGCGTGGCTTTCATTAAGGTCAGCATGGATGGTGCACCCTATCTACGCAAGGTGGACCTCAAATTATACAAGAGCTACCTGGAACTCTCTGATGCCCTTGCTAAAATGTTCAGCTCATTCACCATTAATGGCCAGTATGGGTCACAAGGGATGAAGGAGTTCTTGAATGAGAGAAAATTGATAGATCTTTTGAATGGTTCTGACTACGTACCAACATACCAAGACAAGGATGGAGACTGGATGCTCGTGGGTGACGTGCCCTGGGAGATGTTCGTTGAATCATGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCAATTGGACTTGCACCGAGAGCGGTGGAAAAGTGCAAGAGCAGAAGCTGA 1034 0.4584 MTSRVEAERDKYSMINFEETELRLGMPGASANDSDCGFKSNCCTNATAHSKRSFSETSTTTAVDLKLNLSSSNNDLPSHSTLTQQKPKDNATAPRANDPAKPPAKAQVVGWPPVRSFRKNIVSAQKNNGDETEKGSGSNRNNSNSVAFIKVSMDGAPYLRKVDLKLYKSYLELSDALAKMFSSFTINGQYGSQGMKEFLNERKLIDLLNGSDYVPTYQDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKSRS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03333 265 MobiDBLite consensus disorder prediction 124 143 - -
Bach1g03333 265 MobiDBLite consensus disorder prediction 70 109 - -
Bach1g03333 265 ProSiteProfiles PB1 domain profile. 146 247 IPR000270 GO:0005515
Bach1g03333 265 MobiDBLite consensus disorder prediction 70 91 - -
Bach1g03333 265 Pfam AUX/IAA family 19 256 IPR033389 -
Bach1g03333 265 FunFam Auxin-responsive protein 141 257 - -
Bach1g03333 265 Gene3D - 140 259 - -
Bach1g03333 265 SUPERFAMILY CAD & PB1 domains 137 246 - -
Bach1g03333 265 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 252 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03333 Bach-Chr1 42136705 42138918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03333 119 250 B3 DNA Binding Superfamily AT2G46530 31.429 7.85e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach1g03333 AUX_IAA 8e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03333 K14484 - qsu:112037338 333.954