Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03323 ATGGATCAGTTTCCTTCCAATTTGTTGCCTGATCAAGCGAGCCCGGAGTGGATGAACAAAGGGGACAACGCGTGGCAACTAACGGCAGCTACGTTGGTGGGACTGCAGAGTATCCCTGGACTTGTAATCCTTTATGGAAGTATCGTGAAAAAGAAATGGGCCGTCAACTCCGCGTTCATGGCCTTTTATGCCTTTGCAGCCGTTCTCTTGTGCTGGGTTGCCTGGGGTTTCCGCATGTCATTTGGAGAAAAACTTGTTTTTTTCTTGGGAAAACCGGCAGTGGCATTGGATGAGAAATTCCTTTTGGGGCAAGCATTTCTTGGCTACATTCCCACAGCTACGATGGTATTTTTTCAGGGTGTCTTTGCCGGGATTACCTTGATTTTAATAGCTGGTTCCTTACTGGGGAGGATGAATATTCGTGCATGGATGTTGTTTGTCCCACTATGGCTTACATTTTCATACACTGTCACTGCCTTCAGCATTTGGTGCCCAGATGGATGGTTAGCCAAGCAGCGAGTCATTGACTTCTCTGGGGGTTATGTCATTCACCTTTCAGCTGGAGTTGCTGGTTTTACTGCATCTTATTGGGTGGGTCCAAGATCGGATGTGGATAAAGAAACGTTCCCCGAAGCAAACAACATGATCATGGTACTAGCAGGTGCAGGCTTGGTTTGGATGGGGTGGAGTGGTTTCAACGGCGGAGGTCCATTCGCGGTGAGCACGCTTGCATCTCTAGCCGTGCTTAACACACACGTGTGTGCAGCCACTAGCATCCTAACCTGGGTCATGCTCGACACCTTTTGCCTCAGCAAGCCCACCGTGTTTGGCGCCGTACAGGGCATGATCACCGGACTCGTTTGCATTACTCCAGCCGCAGGAGTTGTGCAATGCTGGGCAGCCATCATAATGGGTGTCATCTCTGGAAGCATTCCTTGGTACACAATGATGGTGCTGCACAACAAGCTCAGCTTTCTTAAACAAATCGATGACCCCATGGCCATCTTTCACACCCATGCCATCGCCGGCGCTCTTGGTGCTATTCTTACTGGCTTCTTTGCCGTGCCTAAACTTTGCCGTCTCTTTTACAATGTGCAGGGAATTGAATACATTGGCTTAGCCTATGCACTTCAAAATGGTGCAACTTCAGCGGGTTTAAGACAAATGGGCATTCAAATTGCTGCCATTGTTTTCGTGATTTGCTTCAACCTTGTCATCACAACCTTGATTTGCTTGTTTGTGCGGACCATTGTGCCACTTAAGCTCCACGATAATGCACTAGAAATTGGTGACAAGGCAGTGCACGGAGAGGAAGCTTTTGTCTTGTGGGCTAGTGAGCATGTAAATTTGCATAACTTTAAGCCCAATAAATTTTATGATGCTCAAGACTTGTCATCCGTTGGGTCACGGTCAATATCAATAGGCGAAATTCAGATGCTACAACATGGTCAAACTGGGCTGTAA 1464 0.4775 MDQFPSNLLPDQASPEWMNKGDNAWQLTAATLVGLQSIPGLVILYGSIVKKKWAVNSAFMAFYAFAAVLLCWVAWGFRMSFGEKLVFFLGKPAVALDEKFLLGQAFLGYIPTATMVFFQGVFAGITLILIAGSLLGRMNIRAWMLFVPLWLTFSYTVTAFSIWCPDGWLAKQRVIDFSGGYVIHLSAGVAGFTASYWVGPRSDVDKETFPEANNMIMVLAGAGLVWMGWSGFNGGGPFAVSTLASLAVLNTHVCAATSILTWVMLDTFCLSKPTVFGAVQGMITGLVCITPAAGVVQCWAAIIMGVISGSIPWYTMMVLHNKLSFLKQIDDPMAIFHTHAIAGALGAILTGFFAVPKLCRLFYNVQGIEYIGLAYALQNGATSAGLRQMGIQIAAIVFVICFNLVITTLICLFVRTIVPLKLHDNALEIGDKAVHGEEAFVLWASEHVNLHNFKPNKFYDAQDLSSVGSRSISIGEIQMLQHGQTGL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03323 487 ProSitePatterns Ammonium transporters signature. 176 201 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bach1g03323 487 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005886
Bach1g03323 487 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005886
Bach1g03323 487 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005886
Bach1g03323 487 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005886
Bach1g03323 487 Pfam Ammonium Transporter Family 24 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bach1g03323 487 FunFam Ammonium transporter 7 443 - -
Bach1g03323 487 SUPERFAMILY Ammonium transporter 17 421 - -
Bach1g03323 487 PANTHER AMMONIUM TRANSPORTER MEP2 6 447 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bach1g03323 487 Gene3D Ammonium transporter AmtB like domains 7 457 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03323 Bach-Chr1 42080873 42082515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03323 113 474 Inorganic Solute Cotransporters AT2G38290 51.892 2.19e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03323 K03320 - gmx:100782944 749.969