Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03313 ATGGAGCAGTACGAAATACTTGAGCAAATTGGAAAAGGTGCCTTCGGGTCTGCTCTACTTGTGAGGCATAAGCATGAGAAAAAAAAATACGTACTGAAGAAGATTCGTCTGGCCCGTCAAACTGAGCGATCTCGTAGATCTGCACACCAGGAGATGGAGCTCATCTCCAAATTAAGAAATCCATTTATTGTGGAGTACAAGGATTCATGGGTAGAAAAGGGTTGCTACGTGTGCATTATTATAGGTTATTGTGAGGGTGGCGATATGGCAGACGCAATAAAGAAAGCTAATGGTGTACTTTTTCCTGAAGAGAAACTTTGCAAGTGGCTTGTTCAACTTCTTATGGCCCTTGACTACTTGCACATGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACGAAAGATCAGGACATACGTCTTGGTGATTTTGGACTAGCTAAAATGCTGACTTCAGATGATCTTGCTTCTTCTGTTGTGGGAACTCCCAGCTACATGTGCCCTGAGCTTCTTGCCGATATACCTTATGGTTCAAAATCGGATATTTGGTCCTTGGGATGTTGTATATATGAAATGACATCTCATAAACCTGCATTTAAAGCATTTGATATACAAGCACTAATCAACAAGATCAATAAGTCCGTAGTGGCGCCGCTGCCAACAAAATATTCTAGTGCTTTTCGAGGTCTTGTTAAAAGAATGCTGCGGAAAAATCCAGAGCTTAGACCTAGTGCTGCAGAGCTGCTTGGACACCGACTTCTTCAACCTTATGTACTGAAGATCCATCTCAAAATCAATAACCCCAGGCGAAGTACATTAGCAGGTCACTGGCCAGAATCCAACTACGCGAAGAAAACTAGATTTATGGAGTCAGAAGCTGATCCTATTTCCATCTATAGGGATAAGCGGTATTCTTTCAGCAATGATCGGACTAAAAATCGTAGTGTATCTGGAGCTGAACAAGATTCTGTATGCTCTACCCTAGAAATTGATTGTATCCCAGATAATTTGAATCAAAGGCTAGCTGAATTATCAGTTGGAGATAGCCATGAAATGAAGTCTATCCGCAAGCCTTTTGTTTCCAGAACCTCTAGTTTTGCCAGGACACCAAGAATTAATTCATTGAAAGCTTCTGCCAGCCCTAAGAAATCAATGGAACCTTCAAAGAATCGCCAGTCGGTAAGACAAGCAGGAACTCCTGTTTCACGCAATGCCAGAAAGTCTGTCCATACAACCCGCAGAGCATCGTTTCCGTTGCCAACAAGAGTTGCCATTCAACGCTCTCCTCGCCGGTCAAGAAGTAGTTCACCCGGCCCTATAAAGTCGCCAGATATTTCAGTCAACTCTCCCCGAATCGATAGGATGGCTGAATTTCCATTAGCATCCTATGAAGATCCATTGTTTCCCATCAACAGAGCTTCAACAAATGCACATGGTTCCTCGGGCTCCCGACATTGTGGTGATCGTTCAATCATGAAAGACAAATGCATGGTTCAGGTGTGTGATAGAGCATCTGTGGGGCCTAGTTTGACAGATGCTTGGCAGGGAATCAAGCGCAGCATGTTTCAGCAAAATGATGAGAAAAGTGGCTCCTCTGATCAAAATGCAACTGCTGGAGCATCAAGCCACACCTCTTCAGACTTGCGCCGCTGGCAGTTTGATACCTCATCATTCCAACAAAGGGCTGAAGCCTTAGAAGGGTTGCTTGAATTTAGTGCAAGATTACTACAACAGGAAAGGTATGAAGAGCTTGAGGTTTTGTTGAAACCATTTGGGCCTGGAAAGGTCTCCCCAAGGGAAACTGCTATCTGGTTGAGTAAGAGCTTTAAAGAGAACATCCAAACATGA 1860 0.4328 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMADAIKKANGVLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSHKPAFKAFDIQALINKINKSVVAPLPTKYSSAFRGLVKRMLRKNPELRPSAAELLGHRLLQPYVLKIHLKINNPRRSTLAGHWPESNYAKKTRFMESEADPISIYRDKRYSFSNDRTKNRSVSGAEQDSVCSTLEIDCIPDNLNQRLAELSVGDSHEMKSIRKPFVSRTSSFARTPRINSLKASASPKKSMEPSKNRQSVRQAGTPVSRNARKSVHTTRRASFPLPTRVAIQRSPRRSRSSSPGPIKSPDISVNSPRIDRMAEFPLASYEDPLFPINRASTNAHGSSGSRHCGDRSIMKDKCMVQVCDRASVGPSLTDAWQGIKRSMFQQNDEKSGSSDQNATAGASSHTSSDLRRWQFDTSSFQQRAEALEGLLEFSARLLQQERYEELEVLLKPFGPGKVSPRETAIWLSKSFKENIQT 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03313 619 MobiDBLite consensus disorder prediction 431 447 - -
Bach1g03313 619 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Bach1g03313 619 MobiDBLite consensus disorder prediction 366 410 - -
Bach1g03313 619 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g03313 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Bach1g03313 619 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g03313 619 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Bach1g03313 619 SUPERFAMILY Protein kinase-like (PK-like) 1 259 IPR011009 -
Bach1g03313 619 Gene3D Transferase(Phosphotransferase) domain 1 86 327 - -
Bach1g03313 619 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bach1g03313 619 CDD STKc_Nek 3 258 - -
Bach1g03313 619 MobiDBLite consensus disorder prediction 366 455 - -
Bach1g03313 619 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g03313 619 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 574 - -
Bach1g03313 619 MobiDBLite consensus disorder prediction 527 552 - -
Bach1g03313 619 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03313 Bach-Chr1 42025032 42029293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03313 10 259 MAP Kinase Kinase Kinase AT1G53570 31.765 1.34e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bach1g03313 Pkinase 3.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03313 K08857 - gmx:100804898 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03313 1 42025032 42029293 Bach1g03313 1 42025032 42029293 ECH