Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03300 ATGCTTTCACTTCTGCAAATAGAGCTTAACACTTTTTCATCTTCTTTTGCTGGTCTTGGTAGAGTTGTGACTAAACTTCATCAGAACATACTTTCTCAGTACGGGAAATTGCTTAGACTAGATTCCAAAAGAATTCCTGCTAATGCTGCTGTCAGTCAGTTCTCAGAGGCATTGGCTAAAGCTTGGTCTGAGTATAATAATCCCAGGTTCGTTGAAAACAAAGAGGACATTTCCAAATTGCGTGAATGCTTTGGTGGATTGTGGAGTTTGGATGACTCAGATATTGCTACAAAGGCAATTGAAAGGCCAGAGTTATTTGTAATGAAGCCCCAACGAGAAGGAGGAGGGAACAATATCTATGGCGATGTCCTAAAATTGCAGAAGGCGGGGTCTGAAGAAGATGCAGCCTACATCCTTATGCAGAGAATATTTCCAACTATATCTGCAACATTTTTGATGCTTAATGGTTATTGTCATAAATATCATGCCATTTCAGAACTTGGGATATATGGTGCTTGCTTAAAGAGCAAGGATAAGGTCATCATAAATGATCAATCTGGCTATTTGATGAGAACAAAAATATCTTCATCCGATGAAGATTTAGCATTTCAAAATCTGTTTTCTATAAGCACTTGTTCGCTTGGTAATGTGCACTATAACTCATCTTTAATTTGTTTTCTATGGAATAAGGCCGAACTTAAGGAGAAACTGGCAAGAATGTATGATGTGAAGGACCCAAACTCCATTTTTGTTTTCAAATTTCGAACTCACTTTGGAGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGATTCAGTCGAGAATGCAAAGAAGTACGAACCCAAGTACAGGCTTATCAGGAATGGACTTGATACCAAGGTAGAAAAGTCAAGGAAGCAGATGAAGGAGAGAAAGAACAGAGCCAAGAAGATTCGTGGAGTAAAGAAGACAAAGGCTTCTGATGCTACCAAGGGTGGAAAGAAGAAATGA 990 0.3879 MLSLLQIELNTFSSSFAGLGRVVTKLHQNILSQYGKLLRLDSKRIPANAAVSQFSEALAKAWSEYNNPRFVENKEDISKLRECFGGLWSLDDSDIATKAIERPELFVMKPQREGGGNNIYGDVLKLQKAGSEEDAAYILMQRIFPTISATFLMLNGYCHKYHAISELGIYGACLKSKDKVIINDQSGYLMRTKISSSDEDLAFQNLFSISTCSLGNVHYNSSLICFLWNKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDATKGGKKK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03300 329 Pfam Eukaryotic glutathione synthase, ATP binding domain 3 199 IPR005615 GO:0004363|GO:0005524|GO:0006750
Bach1g03300 329 Gene3D - 8 56 IPR014049 GO:0004363|GO:0005524
Bach1g03300 329 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 229 300 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bach1g03300 329 PANTHER GLUTATHIONE SYNTHETASE 3 69 IPR005615 GO:0004363|GO:0005524|GO:0006750
Bach1g03300 329 Pfam Ribosomal protein S24e 229 295 IPR001976 GO:0003735|GO:0005840|GO:0006412
Bach1g03300 329 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 3 199 - -
Bach1g03300 329 Gene3D - 227 324 - -
Bach1g03300 329 Gene3D - 87 147 IPR014709 -
Bach1g03300 329 MobiDBLite consensus disorder prediction 294 329 - -
Bach1g03300 329 ProSitePatterns Ribosomal protein S24e signature. 258 280 IPR018098 -
Bach1g03300 329 Hamap 30S ribosomal protein S24e [rps24e]. 190 298 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03300 Bach-Chr1 41949626 41953172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03300 229 324 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.458 4.31e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03300 K21456 - pop:18104039 212.616