Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03249 ATGTGTGTGCCTGAAGGTGAGAGAGATCATAGCGAGCTGAGAAGCATGGCACTGGAAGCAGTTGTTTATCCACAAGATCCATTTGGTTATGATGGCAAAGACCTCTTCACCAGCTTGTTAGGAGGAGGAGGAGGAGGAGGGGGAGGTGGAACCAACTGGGTTTATGACGATTTCAGCCTTGGAAAACAAGAAGATCAAGGCGCCATTGGTTTTCTCGAGAACCAAACGGAAACTAATTATGCTTATGCAGATTGGAATTGTTCTCCTTCATCGTCAATGTTACCCCACTTTAATGAATTGCATCTCTCCAATTCTAATTTCTCAGACACCACCACCAACGCCAGTGATCCAACTCCAAGCGAAGCCAACAACTTAGATAGCTCAACTTCGGTGGTTTCACGTCCTAAACGACGCCGTGCAAGAAGCCGAAAAAACAAGGAAGAAATTGAGAACCAGAGAATGACTCACATTGCTGTGGAGCGCAATCGAAGAAAGCAAATGAACGAGTATCTCTCGGTTCTTCGTTCTTTAATGCCAGATTCATACGTCCAAAGGGGTGACCAAGCTTCTATAATTGGAGGTGCCATTAATTTTGTTAAGGAGCTTGAGCAGAAGCTGCAATTCCTTGGTGCTCAGAAAGAACCTGCAGAGGGCAAATCTGATGGCGGTGCAACTATGCCCTTCTCGGAGTTCTTCACCTTTCCTCAGTATTCAACAAGTTCTAGTGGCTGTGATACTAGTTCCGTGGCCATAGCTGAGCAAGCGGGTGGAGAGGTTCAAGGTGGTATTGCTGATATAGAGGTGACAATGGTGGAGAGCCATGCAAATCTCAAAATAAGATCAAAGAAGCGACCAAAGCAGCTGTTGAAGGTGGTCTCTGGCTTACATACAATGCGTCTCACAATCTTGCACCTAAATGTCACAACCACTGCTGATATTGTCCTCTATTGTTTCAGTGTAAAGGTAGAGGATGACTGCAAGTTGGGATCAGTGGATGAGATAGCAGCAGCTGTATACCAAATGCTGGACAGGATACAACACGAGGCAATATTGTTGAATTGAAGATTCCAGCTTGGACTAATTGGCTGCATTCTTTTTTGTTTCTCACCTTAGAAATCTTAATTATTCAATGGGTATTTCCTTTAGTTTTAAAAGTGTACCAAATTATTGCAACTTCTGTTCCTCCTTTTGTTGATTTATTT 1202 0.4368 MCVPEGERDHSELRSMALEAVVYPQDPFGYDGKDLFTSLLGGGGGGGGGGTNWVYDDFSLGKQEDQGAIGFLENQTETNYAYADWNCSPSSSMLPHFNELHLSNSNFSDTTTNASDPTPSEANNLDSSTSVVSRPKRRRARSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKLQFLGAQKEPAEGKSDGGATMPFSEFFTFPQYSTSSSGCDTSSVAIAEQAGGEVQGGIADIEVTMVESHANLKIRSKKRPKQLLKVVSGLHTMRLTILHLNVTTTADIVLYCFSVKVEDDCKLGSVDEIAAAVYQMLDRIQHEAILLN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03249 353 Gene3D - 136 217 IPR036638 GO:0046983
Bach1g03249 353 SMART finulus 157 208 IPR011598 GO:0046983
Bach1g03249 353 MobiDBLite consensus disorder prediction 108 131 - -
Bach1g03249 353 Pfam Helix-loop-helix DNA-binding domain 152 203 IPR011598 GO:0046983
Bach1g03249 353 CDD bHLH_AtFAMA_like 154 227 - -
Bach1g03249 353 PANTHER MAX DIMERIZATION, MAD 83 349 - -
Bach1g03249 353 MobiDBLite consensus disorder prediction 108 149 - -
Bach1g03249 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 216 IPR036638 GO:0046983
Bach1g03249 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 202 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03249 Bach-Chr1 41596574 41598054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03249 16 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 45.401 1.03e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g03249 HLH 5.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03249 - - gmx:100782243 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03249 1 41596574 41598054 Bach1g03249 1 41596574 41598054 ECH