Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03248 ATGAATTCAAGGATGAATCCAATTAGATCGAGCTCTGGGATAATTTCTTTGTGCCTGGTCCTCCTCCTCTTGCCGGAGATTCCATTGACCAGAGCACAATCCGGAACCAATGCCGCAAACGACCAGTATTACAACCAGTTCAGCCCCTCTATGGCCATCATCATTATCATATTGGTTGCGGCTCTTTTCTTGATTGGCTTCTTCTCCATCTACATCCGCCAATGCGCCGATTCACCATCCAACAGCGTTCGACCTCTCGGCGGTACTGCCGGCCGTTCCAGGCGCGCAGCTCGTGGCCTTGATCCTGCTGTGATTGAAACTTTCCCAACTCTTGAGTATTCTCTAGTTAAGATTCATAAGATTGGAAAAGATGCACTGGAATGTGCCGTCTGCTTATGCGAATTCGAGAACACCGAAACGCTGCGTTTAATCCCGAAATGCGACCACGTCTTCCACCCGGAGTGTATCGATGAATGGTTAGCTTCTCACACTACTTGTCCCGTTTGCCGAGCCAACCTCGTTCCACAACCAGGAGAATCTGTGCACGGAATTCCTGTTCTAAACGTTGATTCAGATGTCGAAGCACAAACCCAAAACGATGCTGTTGAAACTGCGCCCGAGCGACAGAATGCGGAGGTTGACCGAGAACAATCGGAGCTGGAGGTTATAAGCGCGAACCGGACGCTAAACCGAAACCGTACGCGGGGGTCTTGGTCCAGCCGGTTACGAAGGTTCTCTTTCCCACGGTCACACTCGACCGGTCACTCACTGATCCAACCGGGTGAAGACACGGAACGGTTCACTTTGAGACTGCCGCTGGAAGTGAGGAAACAAATAATAAACCAGAAATTGCATCGGGCCACAAGCTTGGTTATCTTGCCGAGAGAAACTAGTTCAAGGCGTGGCTATCGAACCGGTGGTGAGGGTAGTAGCAGAGGCAGGTTTTCCCGGCGGCTTGACCGGGGCTTCAAATCAGATAAGTGGGTTTTGGTGATGGCGCCGCCCTTCTTAGTGAGGGCCTCGTCGATTAGGATTCCGAAGGTGGCTAACAGCGCCGGTGAAGAGACCTCTACTGAGCCCCTTGCGCCACACGCAACCGAGTCCACCCGGCCCCCGGTTTAA 1122 0.5232 MNSRMNPIRSSSGIISLCLVLLLLPEIPLTRAQSGTNAANDQYYNQFSPSMAIIIIILVAALFLIGFFSIYIRQCADSPSNSVRPLGGTAGRSRRAARGLDPAVIETFPTLEYSLVKIHKIGKDALECAVCLCEFENTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPGESVHGIPVLNVDSDVEAQTQNDAVETAPERQNAEVDREQSELEVISANRTLNRNRTRGSWSSRLRRFSFPRSHSTGHSLIQPGEDTERFTLRLPLEVRKQIINQKLHRATSLVILPRETSSRRGYRTGGEGSSRGRFSRRLDRGFKSDKWVLVMAPPFLVRASSIRIPKVANSAGEETSTEPLAPHATESTRPPV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03248 373 PANTHER RING FINGER DOMAIN-CONTAINING 34 179 - -
Bach1g03248 373 FunFam E3 ubiquitin-protein ligase ATL6 89 176 - -
Bach1g03248 373 CDD RING-H2_EL5-like 127 170 - -
Bach1g03248 373 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
Bach1g03248 373 Pfam Ring finger domain 127 170 IPR001841 -
Bach1g03248 373 SUPERFAMILY RING/U-box 122 177 - -
Bach1g03248 373 MobiDBLite consensus disorder prediction 349 373 - -
Bach1g03248 373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 175 IPR013083 -
Bach1g03248 373 SMART ring_2 128 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03248 Bach-Chr1 41583160 41584281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03248 12 356 Rapid Response to Elicitors AT3G05200 43.597 1.03e-87 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03248 K10664 - gmx:100810865 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03248 1 41583160 41584281 Bach1g03248 1 41583160 41584281 ECH