Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03243 ATGGATCACCAAGGCCATAGCCAGAACCAATCTATGGGAGTTGTTGGTGGGGGTGGTCAATTGGCATATGGTTCAAACCCATACCAACCAAACCAAATAACTGGGACACCAGGGTCAGTTGTCACATCAGTTGGAGCCATTCAATCTGCTAGTCAGCCTTCTGGAGCTCAGCTGGGACAACATCAACTTGCTTACCAGCATATTCATCAGCAACAACAGCAGCAACTTCAGCAACAACTCCAATCCTTCTGGGCAAATCAATACCAAGAAATTGAGAAGGTGGCTGATTTCAAGAACCACAGCCTTCCCTTGGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTTAGAATGATATCAGCTGAAGCACCAGTTGTATTTGCAAGAGCATGTGAAATGTTTATATTAGAGTTAACTTTGCGTTCTTGGAATCATACTGAAGAGAACAAAAGGAGAACACTTCAGAAGAATGATATTGCAGCAGCAATCACAAGGACTGATATCTTTGATTTCTTGGTTGACATTGTTCCTCGTGAGGACTTGAAAGATGAAGTACTTGCTTCCATCCCTAGAGGAACAATGCCTGTTGCAGGGCCTGCTGATGCCCTTCCATATTGCTACATGCAACCTCAGCATGCCCCTCAAGTTGGCAGTGCTGGTGTCATAATGGGTAAACCTGTGATGGATGCAAGTATATATGCTCAACAGTCTCATCCCTACATGGCACAACAGATGTGGCCACATGCACCAGAACAACGACAACCATCTCCAGAGCATTGA 783 0.4496 MDHQGHSQNQSMGVVGGGGQLAYGSNPYQPNQITGTPGSVVTSVGAIQSASQPSGAQLGQHQLAYQHIHQQQQQQLQQQLQSFWANQYQEIEKVADFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMQPQHAPQVGSAGVIMGKPVMDASIYAQQSHPYMAQQMWPHAPEQRQPSPEH 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03243 260 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
Bach1g03243 260 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 164 IPR003958 -
Bach1g03243 260 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 202 - -
Bach1g03243 260 FunFam Nuclear transcription factor Y subunit gamma 66 179 - -
Bach1g03243 260 SUPERFAMILY Histone-fold 72 173 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03243 Bach-Chr1 41543870 41544652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03243 1 247 CCAAT-HAP5 Transcription Factor Family AT1G08970 61.694 1.67e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bach1g03243 CBFD_NFYB_HMF 4.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03243 K08066 - gmx:100527803 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03243 1 41543870 41544652 Bach1g03243 1 41543870 41544652 ECH