LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g03224	ATGCAGGACATTTTTGGATCAGTTCGCCGATCACTGGTATTCCGCACTTCTCCGGAGAACGAAGAAGTTCCACTTGGAGGAACCCTAGTGGATAAGATTAATTCTTGCATCCGCAAGTCCAAAGTGTTCTCTAAACCCTCGCCGGCGTCACCGCCATTACCATCTGCCCCCATGGATACTTCACCTGTGATCCGATGGCGCAAGGGAGAGTTGATCGGCTGCGGTGCCTTTGGCCGAGTTTACATGGGGATGAATCTTGATTCGGGCGAGCTTTTAGCAGTGAAACAGGTTCTTATTGCGACAAATAGTGCTTCCAAGGAGAAGGCACAGACTCACATGAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTAGGTACAGTTAGAGAGGAGGACAGCTTAAATATACTCCTGGAGTTTGTACCTGGTGGATCCATATCATCACTCTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTGTGAGAACTTTCACAAAACAATTATTGCTGGGACTGGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGAGCAAATATTCTTGTAGACAATAAGGGATGCATAAAACTTGCAGATTTTGGGGCATCCAAACAGGTCGTTGAGCTGGCTACCATTTCTGGTGCTAAGTCTATGAAGGGTACCCCATACTGGATGGCTCCCGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGATATATGGAGTGTTGGCTGCACTGTGATCGAGATGGCCACCGGGAAACCGCCTTGGAGCCAACAGTACCAAGAGGTTGCTGCTCTCTTCTATATCGGGACAACAAAGTCTCATCCACCTATCCCTGAGCATCTCTCTGCTGGAGCAAAAGATTTTCTGTTGCAATGTTTGCAGAAGGAACCAAATCTGCGGCTATCAGCAGCAGAGTTGCTGCAGCATCCCTTTGTTACTGGTGAACACACGGATTCTCTTCCTCGTTCGAGTGCTTCTGCCATGGAAAATTCTGTGGCTTCTTCATCATCATGTGTTGCCAACATCAATGCTGAAAATTCTGTGTGCTATTCAGCTCTTCAACCTCAGGAGTCAGGTGATAAACAATTTTGGGGAATGAATGATGATGATGACATGTGTGAGATTGATGACAAAGATGATTTCTCAGAGGTGGATGTCAAAGTCAGATCTTCTTTGATGTCAGAAAATATTAAGAGTTTCAACCCAATGTCTGATCCGTCAGATGATTGGAGCAAATTTGATGCGAGTTCAGAACTGGAACAAAGAGCAGTTAATTTTGATACTGATGAACTTGACATGCCTTCTGGTCACTCTGGGACTTCCAATGAGGGGCCGAAAGATTTTTCCTTTCCATGTGGACCATCCCTCTCTGAGGAAGATGACGAGCTTACGGAGTCAAAAATTAAAGCCTTTTTGGATGAGAAGGCTATAGAACTGAAAAAACTGCAGACACCTTTGTATGAAGAGTTCTATAATACTTTGAATACGTCTTGTTCTCCCAACTTGGTTGAAAACACGAATGATGAAACTGCTCCAAAGTACCTGAAATTACCTCCTAAAAGTAGGTCACCAAGTCGGCCACCATTGGGAACCCCATCAAAGGCTGTTGAGAGTTTTAGTGCTGGAAGTCCTGGAAGTAATGGCAGGTCTCCTTCAAATGTTGGCAATGCAGGTGATCATAGTTCACAGGATATTCCATCATCTCCAATAAATGAATTGAAAGGAGTTTTAGTTGACTCCCAGCTGGAGCCAACTAGCCCCAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAGGAGCTTGACGAGGAGCTCGAGAGAAAGCGAGAAATGATGCGCCAAGCAGGTATGGGCGGAAAGACATCGTCACCCAAGGATCGAGTTTTGCATCGGCAGCGAGAACGGACAAGATTTGCATCTCCCAGCAAATAA	1983	0.4523	MQDIFGSVRRSLVFRTSPENEEVPLGGTLVDKINSCIRKSKVFSKPSPASPPLPSAPMDTSPVIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIATNSASKEKAQTHMKELEEEVKLLKDLSHPNIVRYLGTVREEDSLNILLEFVPGGSISSLLGKFGAFPEAVVRTFTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFYIGTTKSHPPIPEHLSAGAKDFLLQCLQKEPNLRLSAAELLQHPFVTGEHTDSLPRSSASAMENSVASSSSCVANINAENSVCYSALQPQESGDKQFWGMNDDDDMCEIDDKDDFSEVDVKVRSSLMSENIKSFNPMSDPSDDWSKFDASSELEQRAVNFDTDELDMPSGHSGTSNEGPKDFSFPCGPSLSEEDDELTESKIKAFLDEKAIELKKLQTPLYEEFYNTLNTSCSPNLVENTNDETAPKYLKLPPKSRSPSRPPLGTPSKAVESFSAGSPGSNGRSPSNVGNAGDHSSQDIPSSPINELKGVLVDSQLEPTSPSLSFSERQRKWKEELDEELERKREMMRQAGMGGKTSSPKDRVLHRQRERTRFASPSK	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g03224	660	MobiDBLite	consensus disorder prediction	609	631	-	-
	Bach1g03224	660	SUPERFAMILY	Protein kinase-like (PK-like)	65	368	IPR011009	-
	Bach1g03224	660	MobiDBLite	consensus disorder prediction	442	477	-	-
	Bach1g03224	660	MobiDBLite	consensus disorder prediction	513	660	-	-
	Bach1g03224	660	FunFam	Serine/threonine-protein kinase STE11	62	156	-	-
	Bach1g03224	660	MobiDBLite	consensus disorder prediction	641	660	-	-
	Bach1g03224	660	FunFam	Mitogen-activated protein kinase kinase kinase 2	65	357	-	-
	Bach1g03224	660	Coils	Coil	99	126	-	-
	Bach1g03224	660	CDD	STKc_MAPKKK	65	328	-	-
	Bach1g03224	660	ProSiteProfiles	Protein kinase domain profile.	66	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g03224	660	Gene3D	Transferase(Phosphotransferase) domain 1	65	367	-	-
	Bach1g03224	660	SMART	serkin_6	66	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g03224	660	Pfam	Protein kinase domain	67	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g03224	660	ProSitePatterns	Protein kinases ATP-binding region signature.	72	95	IPR017441	GO:0005524
	Bach1g03224	660	Coils	Coil	611	631	-	-
	Bach1g03224	660	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	190	202	IPR008271	GO:0004672\|GO:0006468
	Bach1g03224	660	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	52	340	-	-
	Bach1g03224	660	MobiDBLite	consensus disorder prediction	552	585	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g03224	Bach-Chr1	41425341	41431012	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g03224	1	660	MAP Kinase Kinase Kinase	AT1G54960	56.547	0.0	692

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Bach1g03224		Pkinase	6e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g03224	K20606		-	gmx:100779001	949.503