Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03219 ATGTTTGGTGCGGTGACGGATACACGACATCAGAGCACTGGATTATCCGGACCCAGTTTGATTCCAAAGCGGTTCGTCTGGTCTTATGGAGGAAGCAGGGTGTTTCTAAGTGGTTCTTTCACTAGGTGGTCAGAACATATTCCTATGTCTCCGATGGAGGGATGCCCTACAGTATTTCAAGTTGTTTGCAGCTTAACTCCCGGATATCATCAGTACAAGTTTAATGTGGATGGTGAGTGGCGGCATGATGAGCAGCAGCCATTTGTAAGTGGGATCTATGGGGTGGTGAATACGATACTTTTAGGGAGGGAACCAGATATTCTACCTTCTATCTTTAGTCCTGGTAGATCCCACATGGAGGTTGACAATGATGTCTTTGGGCATGCGGAAGCCATTCCGAGGATGTCACAGTCTGACCTGGAGGTCTCTCGTAACCGTATATCTATATTCTTGTCTACATATACTGTTTATGGGTTGCTTCCTAAGTCAGGCAAGGTTGTTTGCTTGGATATCACTTTACCAGTTAAGGAAGCATTCCATGTTCTATATGAAGAGGGAGTACCAATGGTTCCTCTATGGGATTCTTGCAAGAGCCAGTTTGTCGGAGTGCTTAGCGCAATGGACTTCATTCTAATATTGAGAGAGCTGGGGAATCATGGGTCAAATTTGACAGAAAAGCAACTTCAGACTCATACAATAGCAGCATGGAAAGAGGGAAAATTACAACGACGACAAAGAATTGATAGCAATGGGAGATCATATTCTCACCACTTTGTTCAAGCTGGGCCTCATGATTGTCTAAAAGATGTGGCTTTGAAAATTTTGCAAAACAAGGTGGCAACAGTTCCTATTGTCGATTCATCTTCATCAGATGGTTCATTTCCTGAGCTGTTACATGTTGCTTCCCTATCAGGAATACTAAAATGTATATGCAGGCACTTTGAGAATTCATTGGGTTCCTTGCCCATTCTTCAACTGCCGATTGGTTCAATACCTTTGGGTACATGGGTACCAAAAGTTGGGGAAACAAATAGGCAGACCCTTGCAAAATTAGGTCCAAACGATTCTCTTGGTGCTGCCCTATCTTTGTTGGTTCAAGCTGAAGTTAGCTCAATACCAATTGTGGATGATAATGATTCATTGCTTGATATATATTCACGGAGTGACATTACTGCATTGGCTAAAGATAAAGCTTATGAACAGATAACAACCCTTGATGAAATCAGTATCAGTCAGGCGTTGCTTTTGGGACAAGATGCAAATTCTCGTTATACCTATCACCATGGCCAGAGATATCACATGTGTTTGAGGTCTGACCCATTGTGCAAAGTGATGGAACGGTTGGCTAATCCTGGGGTTAGGAGGCTTGTGATTGTGGAGGCTGGCAGCAAGCGTGTTGAAGGGATTATTTCATTGAGTGATGTGTTCGGATTCTTGTTAGGATATGTTAGCCATCATCTCACATGATGGCATTGGAGATGACTCGTTGTTCTAATAACACTTGTTATCTCTGAGTTGTCCCTCTGCGTCCCTGTTCTGCTCTGGTTATTTTTCTGTCTTGGCTGATGGGCATCTTCGGCTGAGCCCACTGGCTTTTTAAGGATAGAAATTCGAAA 1616 0.4325 MFGAVTDTRHQSTGLSGPSLIPKRFVWSYGGSRVFLSGSFTRWSEHIPMSPMEGCPTVFQVVCSLTPGYHQYKFNVDGEWRHDEQQPFVSGIYGVVNTILLGREPDILPSIFSPGRSHMEVDNDVFGHAEAIPRMSQSDLEVSRNRISIFLSTYTVYGLLPKSGKVVCLDITLPVKEAFHVLYEEGVPMVPLWDSCKSQFVGVLSAMDFILILRELGNHGSNLTEKQLQTHTIAAWKEGKLQRRQRIDSNGRSYSHHFVQAGPHDCLKDVALKILQNKVATVPIVDSSSSDGSFPELLHVASLSGILKCICRHFENSLGSLPILQLPIGSIPLGTWVPKVGETNRQTLAKLGPNDSLGAALSLLVQAEVSSIPIVDDNDSLLDIYSRSDITALAKDKAYEQITTLDEISISQALLLGQDANSRYTYHHGQRYHMCLRSDPLCKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFGFLLGYVSHHLT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03219 488 Pfam CBS domain 432 480 IPR000644 -
Bach1g03219 488 Pfam CBS domain 350 391 IPR000644 -
Bach1g03219 488 Gene3D - 316 480 IPR046342 -
Bach1g03219 488 CDD E_set_AMPKbeta_like_N 24 100 - -
Bach1g03219 488 Pfam Glycogen recognition site of AMP-activated protein kinase 21 100 IPR032640 -
Bach1g03219 488 Gene3D Immunoglobulins 19 101 IPR013783 -
Bach1g03219 488 SUPERFAMILY E set domains 20 100 IPR014756 -
Bach1g03219 488 SUPERFAMILY CBS-domain pair 345 485 IPR046342 -
Bach1g03219 488 ProSiteProfiles CBS domain profile. 343 400 IPR000644 -
Bach1g03219 488 Gene3D - 136 315 IPR046342 -
Bach1g03219 488 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 136 479 - -
Bach1g03219 488 ProSiteProfiles CBS domain profile. 159 221 IPR000644 -
Bach1g03219 488 SMART cbs_1 347 395 IPR000644 -
Bach1g03219 488 SMART cbs_1 431 480 IPR000644 -
Bach1g03219 488 SMART cbs_1 165 214 IPR000644 -
Bach1g03219 488 FunFam Sucrose nonfermenting 4-like protein 18 103 - -
Bach1g03219 488 SUPERFAMILY CBS-domain pair 145 316 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03219 Bach-Chr1 41389034 41395834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03219 25 116 Protein tyrosine phosphatase (PTP) family AT3G01510 33.684 2.79e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03219 - - qsa:O6P43_011107 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03219 1 41389034 41395834 Bach1g03219 1 41389034 41395834 ECH