Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03217 ATGGACAATGAGCAAGATAGCCTGTTGCCCATTGCAAATGTGGGTAGGATCATGAAGCAAATTCTTCCTCCTAGTGCAAAGATCTCCAAGGAATGCAAACAAGTAATGCAAGAATGTGCAACAGAGTTCATAAGTTTTGTGACTAGTGAGGCTTCTGACAAGTGTCAAAAGGAGAATCGGAAGACTGTCAATGGGGATGACATCTGTTGGGCTCTGAGTGCCTTAGGGTTTGATAACTATGCTGAGGCCATAGGCAGGTACTTGCATAAATACAGGCAAGCTGAGAGGGAGAAAGCAAATCAAAGCAAAAGCGATGACGCCCAAGAAAAGTATGAAGCATCATCAACCAAAAGAAGCAGACAAGAAGAGAAGCTAACTGAAGTTGTTCATGCTCCAATACAACGTAGGGTTCCTGAGAAGGCTGAAATCTCTCCTGCAAATCAACCTTGA 450 0.4356 MDNEQDSLLPIANVGRIMKQILPPSAKISKECKQVMQECATEFISFVTSEASDKCQKENRKTVNGDDICWALSALGFDNYAEAIGRYLHKYRQAEREKANQSKSDDAQEKYEASSTKRSRQEEKLTEVVHAPIQRRVPEKAEISPANQP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03217 149 Gene3D Histone, subunit A 1 140 IPR009072 GO:0046982
Bach1g03217 149 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 72 IPR003958 -
Bach1g03217 149 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 121 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach1g03217 149 MobiDBLite consensus disorder prediction 93 149 - -
Bach1g03217 149 SUPERFAMILY Histone-fold 5 125 IPR009072 GO:0046982
Bach1g03217 149 ProSitePatterns NF-YB/HAP3 subunit signature. 39 55 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach1g03217 149 PRINTS CCAAT-binding transcription factor subunit A signature 36 54 - -
Bach1g03217 149 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Bach1g03217 149 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Bach1g03217 149 MobiDBLite consensus disorder prediction 93 137 - -
Bach1g03217 149 FunFam Nuclear transcription factor Y subunit B-6 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03217 Bach-Chr1 41371855 41372304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03217 4 129 CCAAT-HAP3 Transcription Factor Family AT1G09030 64.062 3.16e-57 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach1g03217 CBFD_NFYB_HMF 3.1e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03217 K08065 - pvy:116118428 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03217 1 41371855 41372304 Bach1g03217 1 41371855 41372304 ECH