Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03216 ATGTCAAACATGACAAGCGGTGATAGCGGGAGCTTCTCTACAGAGAACGCCGGCGAGGGTGGAGTTAAACGACAGCATGAGCAAACAGAGGTTGTCGGTCAGTTTCATTGTCCAAACTACTCTCTCACTTCTTCAGCTACAACTATTAGTAACGGTTCCAACTCCAACACAAATTCGCAGCAGCCACCTCCACCAGCTAAGAAGAAACGAAGCCTGCCAGGAAATCCAGATCCAAATGCTGAGGTGATTGCTCTATCCCCAAACACCCTAATGGCGACGAACAGATTTATATGTGAAATATGCAACAAAGGATTTAAAAGGGATCAAAACCTTCAATTGCACCGGCGAGGCCATAACCTGCCATGGAAGCTCAAACAAAGGACAACCACCGAAGTTCGAAAACGGGTTTATCTTTGTCCAGAATCTACGTGCGTTCATCACAATCCAGCGCGTGCATTGGGTGATCTCACTGGCATCAAAAAGCACTTCTGCAGAAAACATGGAGAGAAGAAATGGAAATGTGATAAGTGCTCTAAGAAATATGCAGTCCAATCTGACTGGAAAGCCCATTTAAAGATCTGTGGTACTAGGGAATATAAATGTGACTGCGGCACCATCTTTTCCAGAAGAGATAGCTTCATCACCCACCGAGCTTTCTGTGATGCCCTGGCTGAGGAGAATAACAAAGCCAATGAAGGGCAAATGCCAAAACTGGGTTCGAGCCTGCAACTGCAAGCTCAACAAATCTCAAACTTCGTTTCCTCATTGCCAATTAATACCAATACCAACCCTCAAATTGGAGCATCAGAGTTTAATCATTCTGATATGAAATCAGCAGTTCCTCACCAGCTGATGCCAATGCCTACGAAACCCTTCGACATGGGCGGCTCCGGGACTTTACTCACTAGAAGGGACACTTCCTCTCCATCTCTTCAGCTCAGCTCAAACTCGCTAAACGCCTTTGAAGAAATTGGGCACCAGTTAGTTGGCTCACCCCACATGTCCGCCACGGCATTGCTGCAAAAAGCTGCACAAATGGGGGCAACTGTGAGTACTACCAGCTCAATGAACCCTTCTATGGCGGAAAGCGGTTTTGTGACAAGCATGGCACCGCCATCATTTGGTGGGTTACAAACTCAAAATGAGACTAGCTTCTTCAACCACTTTGTGCAGAATGGCCAACACCAACAGGATATTCCAACTCAGTATTTCAGTGGGAATGGGATGCCTGCAGCAGGTAACGTTGGAATGAACAGTGTGGATATGTTTAACGCTATATTGGATCAGAGTAAAGCTTTGTCAAAGATTATAGAGCAAAATAGAGGAAGCAATAATGGAGTTCTGCATGGTGGGGGTGCAATTAATTCTGGGTCTAGTACCGGTGCTGGAACTAAAGAAAGTGGGGATGTGACGACTCTTGATTTCTTGGGGATAGGTGGTGGAGAAGGAGGAGGTGCTCATGGGAATTTTTATGGCCAACAAGCAGAAAAAGCAGCAAGACATGAAGCTTGGAGAAACTGGTCAGCCAAGAACGCAGGCTTTGAATCATTCTCAGCAACAAGCAGCCTTTGA 1572 0.4606 MSNMTSGDSGSFSTENAGEGGVKRQHEQTEVVGQFHCPNYSLTSSATTISNGSNSNTNSQQPPPPAKKKRSLPGNPDPNAEVIALSPNTLMATNRFICEICNKGFKRDQNLQLHRRGHNLPWKLKQRTTTEVRKRVYLCPESTCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHLKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKANEGQMPKLGSSLQLQAQQISNFVSSLPINTNTNPQIGASEFNHSDMKSAVPHQLMPMPTKPFDMGGSGTLLTRRDTSSPSLQLSSNSLNAFEEIGHQLVGSPHMSATALLQKAAQMGATVSTTSSMNPSMAESGFVTSMAPPSFGGLQTQNETSFFNHFVQNGQHQQDIPTQYFSGNGMPAAGNVGMNSVDMFNAILDQSKALSKIIEQNRGSNNGVLHGGGAINSGSSTGAGTKESGDVTTLDFLGIGGGEGGGAHGNFYGQQAEKAARHEAWRNWSAKNAGFESFSATSSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03216 523 SMART c2h2final6 172 192 IPR013087 -
Bach1g03216 523 SMART c2h2final6 96 118 IPR013087 -
Bach1g03216 523 MobiDBLite consensus disorder prediction 1 79 - -
Bach1g03216 523 Gene3D Classic Zinc Finger 150 230 - -
Bach1g03216 523 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Bach1g03216 523 FunFam protein indeterminate-domain 5, chloroplastic-like 150 229 - -
Bach1g03216 523 MobiDBLite consensus disorder prediction 32 65 - -
Bach1g03216 523 MobiDBLite consensus disorder prediction 444 466 - -
Bach1g03216 523 Pfam Zinc-finger double-stranded RNA-binding 96 118 IPR022755 -
Bach1g03216 523 FunFam protein indeterminate-domain 12-like 75 143 - -
Bach1g03216 523 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 118 IPR013087 -
Bach1g03216 523 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 53 493 IPR031140 -
Bach1g03216 523 MobiDBLite consensus disorder prediction 1 18 - -
Bach1g03216 523 Gene3D Classic Zinc Finger 92 119 - -
Bach1g03216 523 SUPERFAMILY beta-beta-alpha zinc fingers 95 192 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03216 Bach-Chr1 41355762 41359088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03216 53 351 IDZ Gene Family AT3G50700 55.758 1.47e-114 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g03216 zf-C2H2_jaz 2.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03216 - - gmx:100813556 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00565 8 3662281 3665548 Bach1g03216 1 41355762 41359088 BWGD
Bach1g03216 1 41355762 41359088 Bach1g03216 1 41355762 41359088 ECH