Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03215 ATGGATCATGCACGGTCGGCCTCGGGGAATGGCGAGGACAACGTGGGAATTCCAGATGATTTGCGATGCAAGAGGTCAGATGGGAAACAGTGGAGATGCACTGCTATGTCCATGCCGGATAAAACAGTCTGTGAGAAGCACTATATCCAGGCAAAGAAGAGGGCAGCTAATTCTGCAATGAGAGCCAATCTAAAGAAAGCTAAAAGAAAGTCACTTGGTGAGACTGATATTTATCTGGAGAGCAAGAGTGATGATTTTGATGTGCCACTTGCAAGCATGAAAGTTGGGGAACCACATTCAGGCTCTGGAAAGAAGTACCTAGAGAAAGTATCAAAAAATCAGTTTCGCTATACACCAGAGACAACGACCTTAAGGAATGCGGTTGTGCGTCATGCTCCAAAGCCAAATGATGATTCACCAGATGATGTTCCCCAGTATGAAGAGAATTGGATGTCTTATGAGTCACCTCCTGCTTCTGGCATGGATTCATCCAGGAAAAGATCACAAAGGAGTTTAGAGGCTAATGCTACAACAGAAAACTCTGATGGAAGTACAGATTCCTCTGAAGACACTGGTGGACAGACCTGCCATCAGTGCAGAAGGAATGACAGAGACAGAGTTATTTGGTGCCTCAAATGTGATAGGAGAGGATATTGTGATAGTTGCATCTCTACATGGTACTCAGACATCTCGTTGGAAGAGATTCAGAGGAGCTGTCCTGCGTGCCGTGGTGCCTGTAATTGCAAAGTTTGCTTACGGAATGATAATTCAATTAAGGTTCGGATACGTGAGATACCTGTTCTAGATAAGTTACAGTATCTTCACTTGCTGTTGTCATCTGTTCTTCCGGTGGTAAAGCAGATCCATCATGAGCAGTGTTTTGAAGTTGAACTTGAAAAGAAATTGCGTGGAACTGACATAGATCTTCCCAGGACAAAATTGAATGCAGATGAGCAGATGTGCTGCAATTTCTGTAGGATACCCATTACTGACTATCATCGACACTGTCCGAATTGCTCATATGATCTATGCATTACTTGCTGTCGAGATCTTCGTGAAGCAAATATTAATCAAAAACCACCAGACCAAGTAAAAATCTCCAATCATAATTTACTAAGTAAGTTCCCCGATTGGAGATCTAACAGTGATGGCAGTATTCCATGCCCCCCTAGGGAGTATGGTGGCTGTGGTTATTCATCTTTAAATTTAAGCCGCATTTTCAAGATGAATTGGGTTGCAAAATTGGTGAAAAATGTGGAGGAAATGGTTAGTGGCTGCAGGGTTTGTAACAATGATGATCACCTAGAAACCAGGTTAAATGATCTCAGACTTCGCCAATATTCTCATAGAGAGGCAAGTGACGATAATTTTCTGTACTGCCCAACCTCTGAAGAACTAAAAACTGATGGGATTGGCAATTTTAGAAAGCACTGGAAAATGGGTCAACCAATTATTGTCAAGCGAGTATTTGATATGTCCTCCATTTCAAGTTGGGATCCAATGGTCATATGGAGTGGGGTTCGAGAGACAGCAGATGAGAAAATGAAAGATGAGAACAGAATGGTTAAGGCCATAGATTGCTTAGATTGGTCTGAGATTGATATTGAGCTTGGTCAGTTCATGAAAGGATACTCCGAGGGGCGTATCCATGAAAATGGTTGGCCACAAACGTTGAAGTTGAAGGATTGGCCTTCACCCAGTGCATCTGAAGAATTTTTGTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTGAATATATTCACTCCAAGTGGGGCCTTCTTAATGTTGCAGCTAAGTTGCCTCATTACTCGTTGCAGAATGATGTAGGACCCAAGATTTATATATCTTATGGGATCAGTGAGGAACTTGGTAGAGGTGATTCAGTGACCAATCTCCACTTCAATATGCGTGACATGGTGTACCTTTTAGTCCATACATGCGAAGTGAAGCTGAAGGGCTGGCAGAGAACTAAAATTGAAAAGATACAAAAAGCTTATAAAGAATCTGAGGTGAAAGGAACGTCTGGGGATCCACAAATACATTCAGGGGGGAGGTCACCTGATTCATCACTCGGTACAGAAAGTGAGGGAGCCGCTTTGGATTCAAATGAGAAAAATTCAACAATGGATCAAAGTTTTGAAGTTTATTCTAGTGCTGAAACAAATAACAATTGTGAACTTCCATGCGGACAAAATGGAGATGTCTCTGAGAAAACACATCCCGGAGTTCTTTGGGATGTTTTCCGTCGGCAGGATATTCCAAAGCTGACTGAATATTTGAAAATGCATTCCAAAGAATTTGGGAAGCTAGATGATATATCAAATGAATTTGTTATGCCTCTTTGCGATGAAGCTGTTTTTCTGGACCAACATCATAAAAGAAAGTTGAAGGAAGAATTTGGAGTGGAACCATGGTCGTTTGAACAGAATTTGGGGGAAGCTATATTTGTCCCTGCTGGTTGCCCTTTCCAAGCAAGGAACGTAATGTCGACTGTCCAGTTGGGCCTTGACTTCTTATCTCCTGAAAGCCTGGCGGAGGCTGTAAGGTTGGCTGAGGAAGTCCGCTGTCTGCCAAATGAACATGAAGCAAAGCTTCAAGTTTTGGAGGTAGGGAAGATATCTCTTTATGCGGCAAGTTCAGCTATCAAAGAAGTTCAGAAACTTGTGCTTGACCCAAAACATGGTGCAGAGATTGGATATGAAGACCGAAATTTGACTGCAATGGTTTCTGAGAACTTGGAGAAAATGGTAAAGCGAAGGCAGATTGCTTGTCCTTGA 2787 0.4227 MDHARSASGNGEDNVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKAKRKSLGETDIYLESKSDDFDVPLASMKVGEPHSGSGKKYLEKVSKNQFRYTPETTTLRNAVVRHAPKPNDDSPDDVPQYEENWMSYESPPASGMDSSRKRSQRSLEANATTENSDGSTDSSEDTGGQTCHQCRRNDRDRVIWCLKCDRRGYCDSCISTWYSDISLEEIQRSCPACRGACNCKVCLRNDNSIKVRIREIPVLDKLQYLHLLLSSVLPVVKQIHHEQCFEVELEKKLRGTDIDLPRTKLNADEQMCCNFCRIPITDYHRHCPNCSYDLCITCCRDLREANINQKPPDQVKISNHNLLSKFPDWRSNSDGSIPCPPREYGGCGYSSLNLSRIFKMNWVAKLVKNVEEMVSGCRVCNNDDHLETRLNDLRLRQYSHREASDDNFLYCPTSEELKTDGIGNFRKHWKMGQPIIVKRVFDMSSISSWDPMVIWSGVRETADEKMKDENRMVKAIDCLDWSEIDIELGQFMKGYSEGRIHENGWPQTLKLKDWPSPSASEEFLLYQRPEFISKLPLLEYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGISEELGRGDSVTNLHFNMRDMVYLLVHTCEVKLKGWQRTKIEKIQKAYKESEVKGTSGDPQIHSGGRSPDSSLGTESEGAALDSNEKNSTMDQSFEVYSSAETNNNCELPCGQNGDVSEKTHPGVLWDVFRRQDIPKLTEYLKMHSKEFGKLDDISNEFVMPLCDEAVFLDQHHKRKLKEEFGVEPWSFEQNLGEAIFVPAGCPFQARNVMSTVQLGLDFLSPESLAEAVRLAEEVRCLPNEHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKHGAEIGYEDRNLTAMVSENLEKMVKRRQIACP 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03215 928 SMART cupin_9 573 858 IPR003347 -
Bach1g03215 928 ProSiteProfiles Zinc finger RING-type profile. 196 243 IPR001841 -
Bach1g03215 928 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 892 IPR045109 GO:0032454|GO:0033169
Bach1g03215 928 Pfam JmjC domain, hydroxylase 744 836 IPR003347 -
Bach1g03215 928 MobiDBLite consensus disorder prediction 678 714 - -
Bach1g03215 928 Pfam WRC 18 58 IPR014977 -
Bach1g03215 928 MobiDBLite consensus disorder prediction 1 21 - -
Bach1g03215 928 ProSiteProfiles JmjC domain profile. 566 858 IPR003347 -
Bach1g03215 928 MobiDBLite consensus disorder prediction 117 198 - -
Bach1g03215 928 SUPERFAMILY Clavaminate synthase-like 475 865 - -
Bach1g03215 928 Gene3D Cupin 452 867 - -
Bach1g03215 928 ProSiteProfiles WRC domain profile. 17 61 IPR014977 -
Bach1g03215 928 MobiDBLite consensus disorder prediction 668 714 - -
Bach1g03215 928 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 191 257 IPR018866 -
Bach1g03215 928 MobiDBLite consensus disorder prediction 156 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03215 Bach-Chr1 41348220 41353978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03215 18 58 GRF Transcription Factor Family AT3G13960 46.341 3.29e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach1g03215 JmjC 1.2e-06 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03215 K15601 - qsa:O6P43_007503 1471.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03215 1 41348220 41353978 Bach1g03215 1 41348220 41353978 ECH