Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03210 ATGAATGCCATGGAAGGGAAGAACTTATCTTCCGATGAAGTTATTGCAAAAATGCTTGAAATGGGGTTTGAATATTCCAATATTGTGATAGCCCTAAAAGCAGTGGGACCTTCTATTGATAGCGTGGTGGGATACATCTTGAATGGTGATGGTAGAAATAGCTGTGGAGCATCAACTACAAGCAGTTCAAAATTGTATGGGGAGAAAGCTTTTAGAAAAGGAGCCCTGCGCTTATCACGTTCTTCAAGTCAAGTTCGGCAGTCTAGCATACTGGACCATTTCCAATCCAATGATAAAACTAAAGAGAGCAAGAGTGGTGACGTAGTTGATATGCCATCTTCTAGTTTTGAAGTTCTTCCATGCAATGTGGAGGCGCACAAGGAGCCTTTATGTGACATCGATGTTGGGCTCAATATGCAGTCTGGATTGCATATAGTTAATTCTATGGAAGAATTTGATATTGGATCAGACTGGGAACAGAAAGTTAGTGGTGTCTTGCAAAAGCATTTTGGTTTTTCGCACATGAAAAGTTTTCAAAAGGAAGCCCTGAGTGCTTGGGTGGCTCATAAAGACTGTTTTGTCCTGGCTGCAACAGGATCTGGAAAATCTTTGTGCTTTCAGATTCCTGCATTATTAACAGGGAAGGTGGTGGTTGTGATTTCACCTTTAATTAGCCTGATGCATGATCAATGCTTAAAGCTAGCAAGACATGGAGTTTCTGCTTGCTTTCTTGGATCTGGGCAATCTGACAAGACTGTTGAACAGAAAGCCATGAGAGGAATGTATAGTATAATATATGTCTGTCCAGAAACACTTCTTAGATTGATTAAACCACTGCAGAAGCTTGCAGAGAGTCGTGGAATTGCTTTATTTGCAATTGATGAAGTTCATTGTGTTTCTAAATGGGGCCATGATTTCCGGCCAGACTACAGACGACTGTCTGCACTGAGGGAAAATTTCACTACTAGCAGACTAAAATTCCTAAAATTTGATATACCTCTAATGGCTTTGACGGCTACAGCAACAAACCGTGTTCGAGAAGACATTCTAAAGTCACTAAGCATGTCAAAAGAAACAAAGATTGTGCTCACTTCATTTTTTCGATCTAATCTACGTTTTTCAGTAAAACATAGTAGAACATCACCATCTTCTTATGAGAAAGATTTTCGTGAATTAATTCAAGTATATGGCAGAAAGAAGAAGACTGATAAAAATAAAAAAGCATTCATCTCAAGGGAATTAGATGACGTGTCTAACAGCTCTGATGCTAGTGGGATATCTGAGACAGAAAATGTTTCTCCAAGTGATATGGATGATGACCAAGTTGATTATACTGATGGAGATATTAGTGCAACATGCTCAAGAAACAAAGATGATTCTATAAAGGGAAAAGAATTATCAGTAGAGTACCTGGAAAATGATATTGATATCTTTCAAAATGTGGATGACTGGGATGTAGCTTGTGGTGAATTTTGTGGACAACGTCCTCAAAACGAGTGGGAATTATGTGATATTGTTGATCCACCAAAAAAGCCAGAAGAAAGACTAAGACTTCGTAAAGAGCCTTTAGAACAAGGACCAACAATTATATATGTGCCCACTCGGAAAGAAACACTGAGAATTGCAAAGTATCTGTGTGAGTTCGGTGTGAAGGCTGCTGCATATAATGCAATGCTGCCAAAATTACATCTAAGAAGGGTTCACAAAGAGTTTCATGAAAACGCTTTGGAGGTTGTTGTTGCAACAATAGCATTTGGAATGGGGATTGACAAATCAAATGTCAGAAGAATTATCCACTATGGTTGGCCGCAGAGTTTGGAAGCCTACTACCAAGAAGCTGGTCGGGCTGGACGAGATGGAAAAATAGCAGATTGCATTCTATATGTAAACCTGGCAAGAATACCTTCCCTTTTGCCAAGTCATAGAAGTGAAGATCAGATCAAACAAGCATATGTCATGTTGTCTGATTGTTTCAGATATGGAATGAATACTTCCTGTTGTCGAGCAAAGACGCTTGTGGAGTACTTTGGAGAGGATTTTGGTCATCAGAAGTGTCTCTTATGTGATGTGTGTGTTAACGGACCACCTCAAATGCAGAATCTGAGAGAGGAGGCATGTATTTTTCTACAAGTTGTAGCTGGCCATTATGACCGTGGCTATGATTTGCGTTGCTTTTACGATGAAGAAAGAAGACTAGGAGAGAGACCAAATCTTAAGATGTTTGTTAGAAAGATAAGGGAGCAGTTTCCAAATTTTACAACCACAGATATATTATGGTGGAGAGGTCTTGCTCGAATTATGGAAGTTAAAGGTTACATCAGGGAGGGGGGTGACAAAACTCATGTTCAGATAAAATACCCGGAGCCAACAGAAACAGGGTTGGAATTCGTCAAATCCATGAGCGAGCAAGCGTTCTATGTTTACCTTGAGGCAGATATGCTGCTTTCAAATAAAACTCGCAAGTCATATTCCTCCTTCTCAGAATGGGGAAAAGGCTGGGCAGATCCCCAGATTCGTCGTCAGCGCTTGGAAAGAATGCAGAAACTCAATAGAAAACCAATGATGCTACGAAGTCCAAAAAAGTCACGAAAGAGGAAAGCTAGTAAGATTAAACCTGACCTGAAGTCTTCTCGGGGGAGGCTAGCGGCGAAACTCGCCAAACATAAGTGATATACTCATTCACATCTAGAATTGGATTTTCATTGATGTTAATGGCAATTTTGTCAATAAATTGAGAAATTTTATAGAGCATTGTTCCCATTTCTTCTCTTCTCACGGAAAAAGTGGCTATGCAGAGCATATCTGTGTTGTATTCCTTTTCTGTCTTTTGACGAGAGTATCTTTTGAGTATCGTCACTATCAACGCTGATTTTGAAGCAAAACGATTAAAAAAAA 2895 0.3959 MNAMEGKNLSSDEVIAKMLEMGFEYSNIVIALKAVGPSIDSVVGYILNGDGRNSCGASTTSSSKLYGEKAFRKGALRLSRSSSQVRQSSILDHFQSNDKTKESKSGDVVDMPSSSFEVLPCNVEAHKEPLCDIDVGLNMQSGLHIVNSMEEFDIGSDWEQKVSGVLQKHFGFSHMKSFQKEALSAWVAHKDCFVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLARHGVSACFLGSGQSDKTVEQKAMRGMYSIIYVCPETLLRLIKPLQKLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSALRENFTTSRLKFLKFDIPLMALTATATNRVREDILKSLSMSKETKIVLTSFFRSNLRFSVKHSRTSPSSYEKDFRELIQVYGRKKKTDKNKKAFISRELDDVSNSSDASGISETENVSPSDMDDDQVDYTDGDISATCSRNKDDSIKGKELSVEYLENDIDIFQNVDDWDVACGEFCGQRPQNEWELCDIVDPPKKPEERLRLRKEPLEQGPTIIYVPTRKETLRIAKYLCEFGVKAAAYNAMLPKLHLRRVHKEFHENALEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKIADCILYVNLARIPSLLPSHRSEDQIKQAYVMLSDCFRYGMNTSCCRAKTLVEYFGEDFGHQKCLLCDVCVNGPPQMQNLREEACIFLQVVAGHYDRGYDLRCFYDEERRLGERPNLKMFVRKIREQFPNFTTTDILWWRGLARIMEVKGYIREGGDKTHVQIKYPEPTETGLEFVKSMSEQAFYVYLEADMLLSNKTRKSYSSFSEWGKGWADPQIRRQRLERMQKLNRKPMMLRSPKKSRKRKASKIKPDLKSSRGRLAAKLAKHK 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03210 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 631 IPR027417 -
Bach1g03210 889 MobiDBLite consensus disorder prediction 417 432 - -
Bach1g03210 889 Pfam DEAD/DEAH box helicase 178 345 IPR011545 GO:0003676|GO:0005524
Bach1g03210 889 Gene3D - 503 629 IPR027417 -
Bach1g03210 889 MobiDBLite consensus disorder prediction 417 451 - -
Bach1g03210 889 FunFam ATP-dependent DNA helicase 503 629 - -
Bach1g03210 889 FunFam ATP-dependent DNA helicase 631 802 - -
Bach1g03210 889 FunFam ATP-dependent DNA helicase 145 367 - -
Bach1g03210 889 SMART helicmild6 539 620 IPR001650 -
Bach1g03210 889 MobiDBLite consensus disorder prediction 854 871 - -
Bach1g03210 889 Pfam Helicase conserved C-terminal domain 517 619 IPR001650 -
Bach1g03210 889 PANTHER DNA HELICASE RECQ FAMILY MEMBER 155 843 - -
Bach1g03210 889 CDD DEXHc_RecQ 165 366 - -
Bach1g03210 889 SMART ultradead3 171 376 IPR014001 -
Bach1g03210 889 MobiDBLite consensus disorder prediction 846 889 - -
Bach1g03210 889 Gene3D - 140 367 IPR027417 -
Bach1g03210 889 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 504 658 IPR001650 -
Bach1g03210 889 NCBIfam RecQ family ATP-dependent DNA helicase 165 394 IPR004589 GO:0004386|GO:0006310
Bach1g03210 889 Gene3D - 633 808 IPR036388 -
Bach1g03210 889 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 183 359 IPR014001 -
Bach1g03210 889 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 8 49 IPR015940 -
Bach1g03210 889 Pfam RecQ zinc-binding 640 691 IPR032284 -
Bach1g03210 889 SUPERFAMILY UBA-like 11 49 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03210 Bach-Chr1 41315812 41322098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03210 521 629 Eukaryotic Initiation Factors Gene Family AT5G11170 27.523 3.28e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03210 K10900 - qsa:O6P43_011098 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03210 1 41315812 41322098 Bach1g03210 1 41315812 41322098 ECH