Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03173 ATGGTAAGGGGGGAAAAGGTTAGTAGCAAACGCAATTGCAGGGGAAGGGTTCGGTCAAAGGGAGGTTCGGATGATTCGGATGAGGACTATGTAGTTTCAGATGAAGATAGATATGTGTCTGATGGTTCAGAGGATTATTGTTCTTTAGATGGATGTGCATCAGAGGAGAGTTTTCAAAGTTACGTAGAAGTAGAGGTGGAGGACGAGGAGGAGGAAATTGAAGGATTAAGGAAAACTAATAGATCAAAGGCAAAAAATGGTTTTTGTGACCAGCGGAAAGGGGGAGGTAAAACACCTAAAAAGAGGGGAAATACTACATATGCACAACAGCTTGAAGAAGAAGAGGAAGAAGATAGAGTAGATGAGGACGAGGATAACTACGAGGAGGAAGATGATGAGGATTTTGTCTTTGATGATGATGAGGAATTTACACCAGAGGAAGAAGAGGATTCAGATGAGGAAGAAGAATTGAGGGGGCGAAAGAAGAAAAATAAGAGCTTGAAAATGGGCAAGAAGGTGTTGCAGAAAAGAGTCTCTGTGATTTCTACTAGGGGTCGAAAGAGGAGGAGGAGAAATTCTAGAGTTGCAAGGAAGCCCTTGAAAAAGAGAAGAAAGAATGCAGGATTGAGGAGGAAAGTAAGATATAATGATGAGGAAGATTTTATGGATTACTCAGCTGTCAGTACAAAGAGTAAGAAAAAACCAGTCCTGAAAAAGAGAAGACTTCTTTCATATTCAGATTCGGACTGTGTGTATTCATCTGATTATGAGTTTACCATCTCGGAGGAAGAGAGAGAACAAGTGAGAGAAGCTGAAGAATTGTGTGGAATTTTGAGACCTAACTTGAGGAGTTCATCGCTTATGATGAAAAATGAAGAGGATGGTGTTGATGAAGATCTACATCGAGAAAGGAAACCCCCAGTTCGGAAGGGTAAGGAAAAGATAGAAGAACCTCAAGGAAAAAAGGGTAAGGAAAAGGTTGAGGATTTAAAAAGTGAGGTGGTAAAGCAAGTATGCGGGATTTGTCTGTCAGAGGAAGATAGAAGAAGAGTAAGAGGGGAACTAAATTGCTGCACTCACTATTTTTGTTTTGCTTGCATTATGGAGTGGTCGAAGGTGGAAACTCGCTGTCCTTTGTGTAAGCAGAGATTCACAACAATTAGCAAGCCTGGACGACCAACACCAGGGGTTGAATTGAGAGAAGTGGTCGTACAAGTACCCGAGCGTGATCAGGTTTATCAGCCTTCCGAGGAAGAACTCAGGAGCTATATTGATCCATATGAATCTGTGATTTGTTCAGAGTGCCATCAAGGCGGAGATGATGCCCTCATGTTGCTGTGTGATCTCTGTGATTCACCTGCACACACATATTGCGTTGGTCTTGGGCGGGTAGTCCCTGAAGGCAATTGGTATTGTGATGGTTGTAGACCAGTTGCTTTGGGATCTTCAAGTTCCCAAGTTCAAGAACATGTGTCTGATTCAAGGGTTACACTCCAGAGCTTGCCTGGTAGACCATCGCATGCGTTACATATACGAGAAACCATAGATCTTAACTTGATGTCTTCACCCCGTTCATCTTTTAGTCAAGTCCTTGGGAATCTTTCGGCATCAAGGTTCTCTGCTAGAAGTTTGGAAGGAGCTTCTCCACTGTCTGGAGGAGGGGTACCAACTTTAACAGGGAGACGCTGGATACAACGTCAAATTCAACAGCTTCTTTCAATCGATAGAATGAATTCTAGAATTGGCAGAATTAATGATATCTCAACTACCAGTTCAAATGGTAACTTGTATAGTTCTCAAATTGATCAGAGTATGGAAACAACCACTCAACATGCAAGGATACAGGACGTGGGAACATCATACCACACATTCCTTGATGATAGATTATGCAATAATTCCTCTCCGTTAATTCCGAATGGGGATGTCTTATCCATGAGAATAAGCAATTCAAGAAGGACACCTGTTCAAGATTCAACTGCATTTACTGACAGAACCGTGAATGGGTCATTATGGCCTGGCCTTTTGGGCACACCCCCACCACAAGTATCAGATTATGAACAAGTCCATCAGTTGAGCAGCAGATCAAACACTGTTACTGATGGTAGCATTTCCCCTGCTGTTAGAGAAGAGAGTCGCATTGCAAAGGAACAGTTACGGTCAATGGTTAAAAGCCACCTGAAGAGTTTGTCACAAGATATTAGTTTAAGCGGCGGTACCTTTAAGGACATTGTAAGGAGTTGTACGCACACCATACTAGCAGCGTGCGGTTTTGAGCACAAGAAGAGTGAGGTTTGCTCTGTTCCGCCACCATCCGTCTGTTCCCACATTCAAGTAATGGCTGTTGGAACAACGAGTCTGCTTCAAGGCTGCTGCTCATCGTGCTTTGATTCTTTTTTAGTAGATGTGGTGAAGACGATTATGGACACAAAATTGTCGTCAGAATGGTTAAGATTAGGTCTTTAGGCATTATTGACATGTGTCCAGAGACACACCTTTTTGTTAGGAGTTAAGCATGACAAGAAAAT 2525 0.425 MVRGEKVSSKRNCRGRVRSKGGSDDSDEDYVVSDEDRYVSDGSEDYCSLDGCASEESFQSYVEVEVEDEEEEIEGLRKTNRSKAKNGFCDQRKGGGKTPKKRGNTTYAQQLEEEEEEDRVDEDEDNYEEEDDEDFVFDDDEEFTPEEEEDSDEEEELRGRKKKNKSLKMGKKVLQKRVSVISTRGRKRRRRNSRVARKPLKKRRKNAGLRRKVRYNDEEDFMDYSAVSTKSKKKPVLKKRRLLSYSDSDCVYSSDYEFTISEEEREQVREAEELCGILRPNLRSSSLMMKNEEDGVDEDLHRERKPPVRKGKEKIEEPQGKKGKEKVEDLKSEVVKQVCGICLSEEDRRRVRGELNCCTHYFCFACIMEWSKVETRCPLCKQRFTTISKPGRPTPGVELREVVVQVPERDQVYQPSEEELRSYIDPYESVICSECHQGGDDALMLLCDLCDSPAHTYCVGLGRVVPEGNWYCDGCRPVALGSSSSQVQEHVSDSRVTLQSLPGRPSHALHIRETIDLNLMSSPRSSFSQVLGNLSASRFSARSLEGASPLSGGGVPTLTGRRWIQRQIQQLLSIDRMNSRIGRINDISTTSSNGNLYSSQIDQSMETTTQHARIQDVGTSYHTFLDDRLCNNSSPLIPNGDVLSMRISNSRRTPVQDSTAFTDRTVNGSLWPGLLGTPPPQVSDYEQVHQLSSRSNTVTDGSISPAVREESRIAKEQLRSMVKSHLKSLSQDISLSGGTFKDIVRSCTHTILAACGFEHKKSEVCSVPPPSVCSHIQVMAVGTTSLLQGCCSSCFDSFLVDVVKTIMDTKLSSEWLRLGL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03173 820 Coils Coil 113 133 - -
Bach1g03173 820 Pfam Ring finger domain 338 381 IPR001841 -
Bach1g03173 820 SUPERFAMILY FYVE/PHD zinc finger 399 477 IPR011011 -
Bach1g03173 820 MobiDBLite consensus disorder prediction 1 212 - -
Bach1g03173 820 MobiDBLite consensus disorder prediction 290 326 - -
Bach1g03173 820 MobiDBLite consensus disorder prediction 110 154 - -
Bach1g03173 820 Pfam PHD-finger 431 477 IPR019787 -
Bach1g03173 820 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 408 483 IPR013083 -
Bach1g03173 820 SUPERFAMILY RING/U-box 338 387 - -
Bach1g03173 820 ProSiteProfiles Zinc finger PHD-type profile. 429 478 IPR019787 -
Bach1g03173 820 PANTHER F18C1.6 PROTEIN 1 810 - -
Bach1g03173 820 MobiDBLite consensus disorder prediction 288 326 - -
Bach1g03173 820 SMART PHD_3 431 476 IPR001965 -
Bach1g03173 820 ProSiteProfiles Zinc finger RING-type profile. 339 381 IPR001841 -
Bach1g03173 820 CDD RING-HC_Topors 337 384 - -
Bach1g03173 820 MobiDBLite consensus disorder prediction 181 210 - -
Bach1g03173 820 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 395 IPR013083 -
Bach1g03173 820 SMART ring_2 339 380 IPR001841 -
Bach1g03173 820 MobiDBLite consensus disorder prediction 1 43 - -
Bach1g03173 820 Coils Coil 66 86 - -
Bach1g03173 820 MobiDBLite consensus disorder prediction 73 97 - -
Bach1g03173 820 ProSitePatterns Zinc finger RING-type signature. 358 367 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03173 Bach-Chr1 41097545 41100256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03173 426 475 C2H2 Transcription Factor Family AT3G01460 43.137 1.72e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach1g03173 PHD 2.9e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03173 - - gmx:100797448 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03173 1 41097545 41100256 Bach1g03173 1 41097545 41100256 ECH