Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03171 ATGGCGTCAAGGAACCGCACTCTGCTGTATAGAAAGTACAGAGATGCCTTGAAGAGTGTTCGGGCTCCCTCTAGCTCTTCTCCGTCCACCACTTCCGCCGGTGCTGGTGGGCCCGTCATTGAATTGGTCAGCACCTCACTTCTCAATCCCAATCGCTCCTACACTCCGCTTAGTACCGAGGATCCTGGCAATTCAAGCAAGGGTCCGCTCACTGTGGGACTACCTCCAGCATGGGTGGATTATTCTGTAGAAATATCTGCAAACGTGCAACGTGCACGTACCAAAATGGCAGAGTTAGCCAAAGCTCATGCAAAGGCTTTAATGCCATCATTTGGAGATGGTAAAGAAGATCAACATGTAATTGAGACTCTCACACATGAGATCACTGATTTAATAAAGAGATCAGAAAGGAGATTGCAAAGACTTTCCGCTGCTGGGCCTTCTGAGGATTCAAATTTGAGGAAAAACGTGCAGCGTTCTCTTGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGGAAGAAACAATCAACTTATCTGAAGCGCCTTAGGCAGCAAAAAGAGAGTCAAGATGGAGTTGATTTAGAGATGAACATAAATGGAAGTAAACCCAGATTTGAAGATGATGACTTAGACAATATGGTATTTAATGAGCATCAGATGGCCAAGCTGAAAAAAAGTGAAGCATTCACTGCAGAAAGAGAAAAAGAGATCCAACAGGTTGTGGAATCTGTAAACGAGCTTGCTCAAATTATGAAAGATTTATCAGTACTAGTGATAGATCAGGGAACTATAGTTGATAGAATAGACTACAACATTCAAAACGTTGCAACCACAATTGAGGACGGCCTCAAACAGTTGCAGAAGGTCCTACTTCCCTTGTTGATTTCATTTCTCCTATCTTCCTGCTCTCCCTCTGATAATCATATATGGTTCGTGGAACATGCAGGCAGAGAGATCACAGAAACAAGGGGGAATGGTAATGTGCATTACGGTGCTTGTTATCATGTGCTTCATAATGTTGGTTCTCCTAATCCTTAA 1041 0.4371 MASRNRTLLYRKYRDALKSVRAPSSSSPSTTSAGAGGPVIELVSTSLLNPNRSYTPLSTEDPGNSSKGPLTVGLPPAWVDYSVEISANVQRARTKMAELAKAHAKALMPSFGDGKEDQHVIETLTHEITDLIKRSERRLQRLSAAGPSEDSNLRKNVQRSLATDLQNLSVELRKKQSTYLKRLRQQKESQDGVDLEMNINGSKPRFEDDDLDNMVFNEHQMAKLKKSEAFTAEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTIEDGLKQLQKVLLPLLISFLLSSCSPSDNHIWFVEHAGREITETRGNGNVHYGACYHVLHNVGSPNP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03171 346 MobiDBLite consensus disorder prediction 51 66 - -
Bach1g03171 346 CDD SNARE_syntaxin16 232 289 - -
Bach1g03171 346 ProSitePatterns Syntaxin / epimorphin family signature. 234 273 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach1g03171 346 SMART tSNARE_6 223 290 IPR000727 -
Bach1g03171 346 MobiDBLite consensus disorder prediction 51 71 - -
Bach1g03171 346 PANTHER SYNTAXIN 84 289 IPR045242 -
Bach1g03171 346 FunFam Syntaxin-43 75 282 - -
Bach1g03171 346 Gene3D - 75 282 - -
Bach1g03171 346 SUPERFAMILY t-snare proteins 74 283 IPR010989 GO:0016020|GO:0016192
Bach1g03171 346 MobiDBLite consensus disorder prediction 19 38 - -
Bach1g03171 346 MobiDBLite consensus disorder prediction 20 34 - -
Bach1g03171 346 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 228 290 IPR000727 -
Bach1g03171 346 SMART SynN_4 69 184 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03171 Bach-Chr1 41089765 41093205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03171 1 289 SNARE and Associated Proteins AT3G05710 77.181 7.98e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03171 K08489 - jre:109011309 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03171 1 41089765 41093205 Bach1g03171 1 41089765 41093205 ECH
Bach8g00388 8 2528807 2532698 Bach1g03171 1 41089765 41093205 ECH