Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03165 ATGGGGATGAAGGAGCACGATCTGGAGTTAGAGAAAGCTCGCTTAGTGAGCTTGGCCCTTGATTTTGGCTTTGATGAAGATTCCGCCAAGAAATGCTTGGATCGTCTTGTTGCTCTTTACGGCAATGATGGCCGTGATTTTATCACTGTGGAGCATTGTGGTGATGATTTTCTGGCAGCTTTAGCCGATTCAATGCAAGATACTGAGGAATGGGATGATTTACAGGCAATGGAATCAGAAGCTTGTGGAACTTTGACTGATATGTTTGATAGAAATGTTGTCAGTTTTAGTGATCCATATGATGACGTTTCAAAATGCTGCATCAATATTATTGAGGATTCACCTGAACCTCGGAAATGCCAGAATGTAGTGGAGGTTGATTCAAGTGACAGTGAAGACGAGGACATTAGTATTCATAGGAAAGAATCTGTGGTAAGATGTGTGACCTCAGATTGTGGAAGTAGCATCACTCAGGGCTCAGTTTCCTTAATGTCCAGCAAAAGACAAGATTCCTTGACGTCAAGGGATGAAAACAGGACTCTCACTTACGAAGAATTACAAGATCTGGATGATGTTGAATTGGCAAATGTTGTCATATTTGGTAACAGGACATTTCGACCATTGCAGCATCAAGCGTGTAAAGTAGCTTTAGCAAAGCAAGATTGTTTTATCCTTATGCCTACTGGAGGTGGTAAATCTCTATGTTATCAGCTTCCTGCAACTCTTCGGCCAGGTGTTACAGTAGTCGTATCCCCCTTACTTTCCCTCATTCAGGATCAGATTATTACATTGAACCTCAAGTTTGGAATTCCAGCTACTTTTTTAAATTCTCAACAAACCTCTTCCCAAGCGGCAGCAGTCCTTCAAGAATTAAGGCGAGATTCACTTCCTCATCTATACAAACCATCATGCAAGCTCTTATATGTGACACCTGAGAGGATTGCTGGCAACCCATCATTTCTTCAAATTCTAAAATACGCGCATCAGAAGGGCCAGCTAGGAGGTTTTGCGGTTGATGAGGCACACTGTGTTAGCCAATGGGGACATGATTTTCGACCTGATTACCGGGGATTAGGATGTCTTAAGCAGAACTTTCCAGATGTACCTGTCATGGCATTGACTGCTACGGCAACGTACTCAGTTCGTCAGGACATCTTAAATGCTTTAAGAATCCCCCATGCACTTGTTCTTGAAAGAAGCTTTGACCGACCGAACTTGAAGTATGAAGTGATTGTTAAGACAAAGGAGTCAATGAAGCAGCTTGGACAGCTAATAATGGATCGTTTCAGGAATCAGTGTGGAATTGTATACTGCCTTTCAAAAAGTGAATGTGTGGAGGTTTCAAAATTCTTGAACGAGAAATGTAAGATTAAGACAGTATATTACCATGCTGGCTTGGCTGTCCGCCAGAGAGTTGCTGTCCAAAAAAAGTGGCACGAGGGACAGGTCCACATAGTATGTGCAACTATTGCTTTTGGAATGGGAATAGACAAAAGCGATGTTCGCTTTGTCATCCACAATACATTGTCGAAATCAATTGAAAGCTATTATCAAGAATCAGGGAGGGCTGGAAGAGATAATCTTCCTGCAGTTTGCATTGCTCTATACCAGAAAAAGGATTTTAGTCGCGTTGTATGCATGTTAAGAAATGGCCAAGGATACAAAAAGGAAAGTTTTAAGACAGCGATGGCTCAAGCCCAAAAGATGCAACAATATTGTGAACTTAAGGTTGAATGCCGAAGACAAACTTTGCTTGAACACTTTGGGGAATCTTTCGACAGAAAAGTCTGCAAGTATGGATCAAACCCCTGCGATAATTGTGTCAAGAGTGCATGA 1836 0.4183 MGMKEHDLELEKARLVSLALDFGFDEDSAKKCLDRLVALYGNDGRDFITVEHCGDDFLAALADSMQDTEEWDDLQAMESEACGTLTDMFDRNVVSFSDPYDDVSKCCINIIEDSPEPRKCQNVVEVDSSDSEDEDISIHRKESVVRCVTSDCGSSITQGSVSLMSSKRQDSLTSRDENRTLTYEELQDLDDVELANVVIFGNRTFRPLQHQACKVALAKQDCFILMPTGGGKSLCYQLPATLRPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQTSSQAAAVLQELRRDSLPHLYKPSCKLLYVTPERIAGNPSFLQILKYAHQKGQLGGFAVDEAHCVSQWGHDFRPDYRGLGCLKQNFPDVPVMALTATATYSVRQDILNALRIPHALVLERSFDRPNLKYEVIVKTKESMKQLGQLIMDRFRNQCGIVYCLSKSECVEVSKFLNEKCKIKTVYYHAGLAVRQRVAVQKKWHEGQVHIVCATIAFGMGIDKSDVRFVIHNTLSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRVVCMLRNGQGYKKESFKTAMAQAQKMQQYCELKVECRRQTLLEHFGESFDRKVCKYGSNPCDNCVKSA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03165 611 CDD DEXHc_RecQ 199 402 - -
Bach1g03165 611 SMART helicmild6 445 527 IPR001650 -
Bach1g03165 611 Gene3D - 403 610 IPR027417 -
Bach1g03165 611 FunFam ATP-dependent DNA helicase 403 610 - -
Bach1g03165 611 PANTHER DNA HELICASE RECQ FAMILY MEMBER 185 608 - -
Bach1g03165 611 Pfam Helicase conserved C-terminal domain 420 526 IPR001650 -
Bach1g03165 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 547 IPR027417 -
Bach1g03165 611 CDD SF2_C_RecQ 403 536 - -
Bach1g03165 611 Pfam DEAD/DEAH box helicase 207 380 IPR011545 GO:0003676|GO:0005524
Bach1g03165 611 SMART ultradead3 201 411 IPR014001 -
Bach1g03165 611 Pfam RecQ zinc-binding 539 607 IPR032284 -
Bach1g03165 611 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 213 395 IPR014001 -
Bach1g03165 611 NCBIfam RecQ family ATP-dependent DNA helicase 199 609 IPR004589 GO:0004386|GO:0006310
Bach1g03165 611 Gene3D - 163 402 IPR027417 -
Bach1g03165 611 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 420 567 IPR001650 -
Bach1g03165 611 FunFam ATP-dependent DNA helicase 186 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03165 Bach-Chr1 41034162 41038793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03165 272 545 Eukaryotic Initiation Factors Gene Family AT5G11170 24.296 2.45e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03165 K10899 - cave:132172585 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g03165 1 41034162 41038793 Bach1g03165 1 41034162 41038793 ECH